RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	GNL1	P36915	607 aa	Predicted RBP	11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	PGF	P49763	221 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	HSF5	Q4G112	596 aa	Predicted RBP	11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	CCDC65	Q8IXS2	484 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	PDILT	Q8N807	584 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	LINC00301	Q8NCQ3	95 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	SCFD1	Q8WVM8	642 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	PNKP	Q96T60	521 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	MMS19	Q96T76	1030 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	BACH2	Q9BYV9	841 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	ELOVL4	Q9GZR5	314 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	VRTN	Q9H8Y1	702 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	KIAA1586	Q9HCI6	787 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	ZDHHC4	Q9NPG8	344 aa		11.88	□□□□□ -0.51
PTPN7-204	ENST00000462815	MYOF	Q9NZM1	2061 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	E2F8	A0AVK6	867 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	HOXC11	O43248	304 aa	Predicted RBP	11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	ADH5	P11766	374 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	PDC	P20941	246 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	TIE1	P35590	1138 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	GRIA2	P42262	883 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	TNFRSF4	P43489	277 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	MYL6	P60660	151 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	KDSR	Q06136	332 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	BMT2	Q1RMZ1	405 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	LY6G5C	Q5SRR4	150 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	DAB2IP	Q5VWQ8	1189 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	PIP4P1	Q86T03	277 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	MIB1	Q86YT6	1006 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	C12orf56	Q8IXR9	622 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	B3GALNT2	Q8NCR0	500 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	ZMIZ2	Q8NF64	920 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	SCAMP5	Q8TAC9	235 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	OVCA2	Q8WZ82	227 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	P2RY11	Q96G91	374 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	KCNK16	Q96T55	309 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	SDCBP2	Q9H190	292 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	EHD2	Q9NZN4	543 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	ZMIZ1	Q9ULJ6	1067 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	SMG1	Q96Q15	3661 aa	Known RBP	11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	FAM208B	Q5VWN6	2430 aa		11.87	□□□□□ -0.51
PTPN7-204	ENST00000462815	UBE4B	O95155	1302 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	CELSR3	Q9NYQ7	3312 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815		A0A1W2PQF6	199 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TULP1	O00294	542 aa	Predicted RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SLC9A3R1	O14745	358 aa	Predicted RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TRIM24	O15164	1050 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	CLIC2	O15247	247 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	DLAT	P10515	647 aa	Known RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	DHPS	P49366	369 aa	Predicted RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	CASP4	P49662	377 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TUB	P50607	506 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SLC5A3	P53794	718 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	CLDN10	P78369	228 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	FOXC1	Q12948	553 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	WDR72	Q3MJ13	1102 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TRIM61	Q5EBN2	209 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SPDYC	Q5MJ68	293 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	FAM26F	Q5R3K3	315 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TDRD10	Q5VZ19	366 aa	Known RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SLC23A3	Q6PIS1	610 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SHC4	Q6S5L8	630 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	HS2ST1	Q7LGA3	356 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	FAM35A	Q86V20	835 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	BBS7	Q8IWZ6	715 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	TMEFF1	Q8IYR6	380 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	NUP93	Q8N1F7	819 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	RDH13	Q8NBN7	331 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	OR6B3	Q8NGW1	331 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	WHAMM	Q8TF30	809 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	PIGK	Q92643	395 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SLITRK1	Q96PX8	696 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	C7orf25	Q9BPX7	421 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	ADAM33	Q9BZ11	813 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SNX25	Q9H3E2	840 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	SMYD3	Q9H7B4	428 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	CCSER2	Q9H7U1	834 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	ARHGEF4	Q9NR80	690 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	PILRB	Q9UKJ0	227 aa		11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	ATXN2	Q99700	1313 aa	Known RBP	11.86	□□□□□ -0.51
PTPN7-204	ENST00000462815	ASCC3	Q8N3C0	2202 aa	Known RBP	11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	UPK3BL1	B0FP48	263 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	UPK3BL2	E5RIL1	263 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	TULP3	O75386	442 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	BEST1	O76090	585 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	ALDH1A2	O94788	518 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	VNN1	O95497	513 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	ADH1C	P00326	375 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	APOD	P05090	189 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	MBL2	P11226	248 aa	Predicted RBP	11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	ENG	P17813	658 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	GABRG2	P18507	467 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	YWHAQ	P27348	245 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	CASP1	P29466	404 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	ATIC	P31939	592 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	CDH8	P55286	799 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	SEMA3B	Q13214	749 aa		11.85	□□□□□ -0.51
PTPN7-204	ENST00000462815	EOGT	Q5NDL2	527 aa		11.85	□□□□□ -0.51

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