RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
ERCC3-206ENST00000462306 KIF26AQ9ULI4 1882 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 BECN2A8MW95 431 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 TULP2O00295 520 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 TCF3P15923 654 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 ZNF18P17022 549 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 AVPR2P30518 371 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 BCAT1P54687 386 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 VCPP55072 806 aaKnown RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 SLC7A9P82251 487 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 PRKCQQ04759 706 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 BST2Q10589 180 aaKnown RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 USP4Q13107 963 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 ZNF77Q15935 545 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 CNGA2Q16280 664 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 RAB41Q5JT25 222 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 SUGP1Q8IWZ8 645 aaKnown RBP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 FLCNQ8NFG4 579 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 SHC3Q92529 594 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 TBC1D17Q9HA65 648 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 HESX1Q9UBX0 185 aa16.72■□□□□ 0.27
ERCC3-206ENST00000462306 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
ERCC3-206ENST00000462306 ZNF318Q5VUA4 2279 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 XPO1O14980 1071 aaKnown RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 CYP26A1O43174 497 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 COCHO43405 550 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 KRT5P13647 590 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 TUBP50607 506 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 CLCN5P51795 746 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 SLC8A3P57103 927 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 STILQ15468 1287 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 ARHGAP44Q17R89 818 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 HECTD3Q5T447 861 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 SMYD5Q6GMV2 418 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 AOPEPQ8N6M6 819 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 TMEM105Q8N8V8 129 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 UBA3Q8TBC4 463 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 SH3RF2Q8TEC5 729 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 SHDQ96IW2 340 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 BPIFA3Q9BQP9 254 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 VPS16Q9H269 839 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 TLR8Q9NR97 1041 aaKnown RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 GKN1Q9NS71 199 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 OSER1Q9NX31 292 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
ERCC3-206ENST00000462306 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.27
ERCC3-206ENST00000462306 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
ERCC3-206ENST00000462306 PI15O43692 258 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 SETSIPP0DME0 302 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 AOC1P19801 751 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 PLA2G4AP47712 749 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 TNK2Q07912 1038 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 TPRG1Q6ZUI0 275 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 SCD5Q86SK9 330 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 SLC35F5Q8WV83 523 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 ZFRQ96KR1 1074 aaKnown RBP16.7■□□□□ 0.26
ERCC3-206ENST00000462306 NMUR1Q9HB89 426 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 CPQQ9Y646 472 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 TICRRQ7Z2Z1 1910 aa16.7■□□□□ 0.26
ERCC3-206ENST00000462306 KMT2EQ8IZD2 1858 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 HELZP42694 1942 aaKnown RBP16.69■□□□□ 0.26
ERCC3-206ENST00000462306 A0A1W2PQH9 124 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 SYCE3A1L190 88 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 LEFTY2O00292 366 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 GABBR2O75899 941 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 COL9A1P20849 921 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 CD72P21854 359 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 TKTL1P51854 596 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 COPB1P53618 953 aaKnown RBP16.69■□□□□ 0.26
ERCC3-206ENST00000462306 MLLT6P55198 1093 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-206ENST00000462306 MTF1Q14872 753 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 PM20D1Q6GTS8 502 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
ERCC3-206ENST00000462306 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
ERCC3-206ENST00000462306 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 KCTD13Q8WZ19 329 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 FOXQ1Q9C009 403 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 CYLDQ9NQC7 956 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 HPS4Q9NQG7 708 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 SMPD4Q9NXE4 827 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 GTSE1Q9NYZ3 720 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 RAPGEFL1Q9UHV5 662 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 PIAS3Q9Y6X2 628 aa16.69■□□□□ 0.26
ERCC3-206ENST00000462306 MYO16Q9Y6X6 1858 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 M0QYV0 167 aa16.68■□□□□ 0.26
ERCC3-206ENST00000462306 FOXN3O00409 490 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-206ENST00000462306 STK25O00506 426 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms