RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 DCHS1Q96JQ0 3298 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 CETN3O15182 167 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 RNF40O75150 1001 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 ZDHHC11BP0C7U3 371 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 MBL2P11226 248 aaPredicted RBP20.07■□□□□ 0.8
VARS-220ENST00000461874 PRCPP42785 496 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 COBLL1Q53SF7 1204 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 HECTD3Q5T447 861 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 ZNF658Q5TYW1 1059 aaPredicted RBP20.07■□□□□ 0.8
VARS-220ENST00000461874 KRT39Q6A163 491 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 FILIP1Q7Z7B0 1213 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 ADGRG2Q8IZP9 1017 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 SPATA20Q8TB22 786 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 EZH1Q92800 747 aaPredicted RBP20.07■□□□□ 0.8
VARS-220ENST00000461874 HNRNPABQ99729 332 aaKnown RBP20.07■□□□□ 0.8
VARS-220ENST00000461874 CFAP97Q9P2B7 532 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 RAB23Q9ULC3 237 aa20.07■□□□□ 0.8
VARS-220ENST00000461874 DMXL1Q9Y485 3027 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 SLC9A3R1O14745 358 aaPredicted RBP20.06■□□□□ 0.8
VARS-220ENST00000461874 COCHO43405 550 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 SMC2O95347 1197 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 TRIM21P19474 475 aaKnown RBP20.06■□□□□ 0.8
VARS-220ENST00000461874 TUBP50607 506 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 MAP3K7CLP57077 242 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 SIM2Q14190 667 aaPredicted RBP20.06■□□□□ 0.8
VARS-220ENST00000461874 WDR5BQ86VZ2 330 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 DDX42Q86XP3 938 aaKnown RBP eCLIP20.06■□□□□ 0.8
VARS-220ENST00000461874 GPR161Q8N6U8 529 aaKnown RBP20.06■□□□□ 0.8
VARS-220ENST00000461874 CCDC150Q8NCX0 1101 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 WHAMMQ8TF30 809 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 NT5C1AQ9BXI3 368 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 GMIPQ9P107 970 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 GMEB2Q9UKD1 530 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 SLC8A2Q9UPR5 921 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 PCDHA5Q9Y5H7 936 aa20.06■□□□□ 0.8
VARS-220ENST00000461874 CILPO75339 1184 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 FAM200BP0CF97 657 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 EPB41P11171 864 aaKnown RBP20.05■□□□□ 0.8
VARS-220ENST00000461874 ADORA2BP29275 332 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 OPRD1P41143 372 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 SRSF5Q13243 272 aaKnown RBP20.05■□□□□ 0.8
VARS-220ENST00000461874 LPAL2Q16609 132 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 GAB4Q2WGN9 574 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 LAIR1Q6GTX8 287 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 PRR23BQ6ZRT6 265 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 SEMA4DQ92854 862 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 RMDN1Q96DB5 314 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 CYFIP2Q96F07 1278 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 ZFRQ96KR1 1074 aaKnown RBP20.05■□□□□ 0.8
VARS-220ENST00000461874 TIGD1Q96MW7 591 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 FBXO44Q9H4M3 255 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 CCSER2Q9H7U1 834 aa20.05■□□□□ 0.8
VARS-220ENST00000461874 CCDC163A0A0D9SF12 145 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 E2F8A0AVK6 867 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 SCAMP3O14828 347 aaKnown RBP20.04■□□□□ 0.8
VARS-220ENST00000461874 STX10O60499 249 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 CYP17A1P05093 508 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 CD58P19256 250 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 TGM1P22735 817 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 MXI1P50539 228 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 DHCR24Q15392 516 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 CLEC20AQ6ZU45 233 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 ZC3H3Q8IXZ2 948 aaKnown RBP20.04■□□□□ 0.8
VARS-220ENST00000461874 FBXL13Q8NEE6 735 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 RPLP0P6Q8NHW5 317 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
VARS-220ENST00000461874 SMARCE1Q969G3 411 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 FAXDC2Q96IV6 333 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 TSG101Q99816 390 aa20.04■□□□□ 0.8
VARS-220ENST00000461874 GTPBP4Q9BZE4 634 aaKnown RBP20.04■□□□□ 0.8
VARS-220ENST00000461874 POLR3BQ9NW08 1133 aaPredicted RBP20.04■□□□□ 0.8
VARS-220ENST00000461874 ATG2BQ96BY7 2078 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 HHLA1C9JL84 531 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 PXNP49023 591 aaPredicted RBP20.03■□□□□ 0.8
VARS-220ENST00000461874 PGFP49763 221 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 FKBP3Q00688 224 aaKnown RBP20.03■□□□□ 0.8
VARS-220ENST00000461874 ANKRD40Q6AI12 368 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 RHBDF2Q6PJF5 856 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 RAB20Q9NX57 234 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 TBC1D14Q9P2M4 693 aa20.03■□□□□ 0.8
VARS-220ENST00000461874 HOOK1Q9UJC3 728 aaKnown RBP20.03■□□□□ 0.8
VARS-220ENST00000461874 HELZP42694 1942 aaKnown RBP20.02■□□□□ 0.8
VARS-220ENST00000461874 SLC16A3O15427 465 aaKnown RBP20.02■□□□□ 0.8
VARS-220ENST00000461874 RETP07949 1114 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 PMS1P54277 932 aaKnown RBP20.02■□□□□ 0.8
VARS-220ENST00000461874 SYT13Q7L8C5 426 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 ELOA2Q8IYF1 753 aaPredicted RBP20.02■□□□□ 0.8
VARS-220ENST00000461874 CAMKK1Q8N5S9 505 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 CCDC26Q8TAB7 109 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 DNAI2Q9GZS0 605 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 PNPLA8Q9NP80 782 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 PARD6AQ9NPB6 346 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 TLR8Q9NR97 1041 aaKnown RBP20.02■□□□□ 0.8
VARS-220ENST00000461874 SCML2Q9UQR0 700 aa20.02■□□□□ 0.8
VARS-220ENST00000461874 CACNA1AO00555 2505 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 K7EQS6 105 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 TLR5O60602 858 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 ADH1CP00326 375 aa20.01■□□□□ 0.79
VARS-220ENST00000461874 FOXK2Q01167 660 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms