RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 EPS15L1Q9UBC2 864 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 CEP83Q9Y592 693 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 MYH10P35580 1976 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 LAMP2P13473 410 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 CEBPBP17676 345 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 TAF10Q12962 218 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 TRIM14Q14142 442 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 TEAD2Q15562 447 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 SPECC1LQ69YQ0 1117 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 TMEM150AQ86TG1 271 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 NPAS3Q8IXF0 933 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 SCAMP5Q8TAC9 235 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 EPS8L1Q8TE68 723 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 FBXO32Q969P5 355 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 MYADMQ96S97 322 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 PDCL3Q9H2J4 239 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 LRRC4Q9HBW1 653 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 SCML2Q9UQR0 700 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 USP3Q9Y6I4 520 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 GREB1Q4ZG55 1949 aa23.67■■□□□ 1.38
C9orf3-209ENST00000460573 PFKLP17858 780 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 IFRD2Q12894 506 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-209ENST00000460573 DENND1BQ6P3S1 775 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 GPRIN1Q7Z2K8 1008 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 VSTM4Q8IW00 320 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 ING5Q8WYH8 240 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 NOX5Q96PH1 765 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 TASP1Q9H6P5 420 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 CYLDQ9NQC7 956 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 AIPL1Q9NZN9 384 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 CAPN11Q9UMQ6 739 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 PATJQ8NI35 1801 aa23.66■■□□□ 1.38
C9orf3-209ENST00000460573 LRRC53A6NM62 1247 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 TULP2O00295 520 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 GJA1P17302 382 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 WEE1P30291 646 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 ACADSBP45954 432 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 RPL34P49207 117 aaKnown RBP23.65■■□□□ 1.38
C9orf3-209ENST00000460573 TKTL1P51854 596 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 SFMBT2Q5VUG0 894 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 SNX30Q5VWJ9 437 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 PMF1Q6P1K2 205 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 CCDC186Q7Z3E2 898 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 NOP9Q86U38 636 aaKnown RBP23.65■■□□□ 1.38
C9orf3-209ENST00000460573 SCML4Q8N228 414 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 DDX1Q92499 740 aaKnown RBP23.65■■□□□ 1.38
C9orf3-209ENST00000460573 MCRS1Q96EZ8 462 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 ASIC4Q96FT7 647 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 TLR8Q9NR97 1041 aaKnown RBP23.65■■□□□ 1.38
C9orf3-209ENST00000460573 FBXL21Q9UKT6 434 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 LUC7L2Q9Y383 392 aaKnown RBP23.65■■□□□ 1.38
C9orf3-209ENST00000460573 MUC6Q6W4X9 2439 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 DOCK6Q96HP0 2047 aa23.65■■□□□ 1.38
C9orf3-209ENST00000460573 TADA3O75528 432 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 ZDHHC11BP0C7U3 371 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 PSEN1P49768 467 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 SNX16P57768 344 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 ZBED6P86452 979 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 CDR2Q01850 454 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 GPR158Q5T848 1215 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 MON1AQ86VX9 555 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 SIX6OS1Q8N1H7 587 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 SYN2Q92777 582 aaPredicted RBP23.64■■□□□ 1.37
C9orf3-209ENST00000460573 NXPE3Q969Y0 559 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 SLITRK6Q9H5Y7 841 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 CNGB3Q9NQW8 809 aa23.64■■□□□ 1.37
C9orf3-209ENST00000460573 NOCTQ9UK39 431 aaKnown RBP23.64■■□□□ 1.37
C9orf3-209ENST00000460573 ZNF840PA6NDX5 716 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 LSM8O95777 96 aaKnown RBP23.63■■□□□ 1.37
C9orf3-209ENST00000460573 ZBED1O96006 694 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 CFHP08603 1231 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 TPM1P09493 284 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 CDH5P33151 784 aaPredicted RBP23.63■■□□□ 1.37
C9orf3-209ENST00000460573 PTPN5P54829 565 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 CYP4F8P98187 520 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 ARID5AQ03989 594 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 PM20D1Q6GTS8 502 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 MTSS1LQ765P7 747 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 IRF2BP2Q7Z5L9 587 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 ARHGAP18Q8N392 663 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 TMEM35BQ8NCS4 154 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 MRFAP1L1Q96HT8 127 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 SLC4A5Q9BY07 1137 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 ZNF318Q5VUA4 2279 aa23.63■■□□□ 1.37
C9orf3-209ENST00000460573 AP5Z1O43299 807 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 FBXO21O94952 628 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 GYPCP04921 128 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 RGS7P49802 495 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TUBP50607 506 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TDGQ13569 410 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 ASIC2Q16515 512 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TAF3Q5VWG9 929 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TRIM72Q6ZMU5 477 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TMEM110Q86TL2 294 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 CPLX3Q8WVH0 158 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 SMARCD2Q92925 531 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 SLC46A2Q9BY10 475 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 TRPV4Q9HBA0 871 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 ST7Q9NRC1 585 aa23.62■■□□□ 1.37
C9orf3-209ENST00000460573 GMIPQ9P107 970 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms