RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 MTAPQ13126 283 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 CUL2Q13617 745 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 ZNF77Q15935 545 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 HECTD3Q5T447 861 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 CLEC17AQ6ZS10 378 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 SYNPOQ8N3V7 929 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 SH3RF2Q8TEC5 729 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC22A12Q96S37 553 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 SMOQ99835 787 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 FAM126AQ9BYI3 521 aaPredicted RBP18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 TLR8Q9NR97 1041 aaKnown RBP18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 TMEM30AQ9NV96 361 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 IL37Q9NZH6 218 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 DACH1Q9UI36 760 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 RWDD2AQ9UIY3 292 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.53■□□□□ 0.56not detected■□□□□ 11.1
SCARNA2-201ENST00000458748 SPTBN4Q9H254 2564 aa18.53■□□□□ 0.56
SCARNA2-201ENST00000458748 TNFRSF10BO14763 440 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 LMNAP02545 664 aaKnown RBP18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 SOX9P48436 509 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 STX17P56962 302 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 CSTF1Q05048 431 aaKnown RBP18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 USP4Q13107 963 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 ZNF394Q53GI3 561 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 SNX30Q5VWJ9 437 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 TXNDC11Q6PKC3 985 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 CLEC20AQ6ZU45 233 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 TADA2BQ86TJ2 420 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 SCAMP5Q8TAC9 235 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 TTC8Q8TAM2 541 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 NELL1Q92832 810 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 NT5C1BQ96P26 610 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 TWNKQ96RR1 684 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 DUSP16Q9BY84 665 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 CLSTN2Q9H4D0 955 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 EBF3Q9H4W6 596 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 KIAA1257Q9ULG3 409 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 PCDHGA2Q9Y5H1 932 aa18.52■□□□□ 0.56
SCARNA2-201ENST00000458748 FAM92AA1XBS5 289 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 NFATC1O95644 943 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 OLFM2O95897 454 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 OAS1P00973 400 aaKnown RBP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 MBL2P11226 248 aaPredicted RBP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 CCR3P51677 355 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 NRLP54845 237 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 MARSP56192 900 aaKnown RBP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 GRSF1Q12849 480 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 TPD52L1Q16890 204 aaPredicted RBP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 WHAMMQ8TF30 809 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 TATDN2Q93075 761 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 NUP62CLQ9H1M0 184 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 ZSCAN32Q9NX65 697 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 HESX1Q9UBX0 185 aa18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 CHORDC1Q9UHD1 332 aaPredicted RBP18.51■□□□□ 0.55
SCARNA2-201ENST00000458748 LEFTY2O00292 366 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 AFPP02771 609 aaKnown RBP18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 PSEN1P49768 467 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 GOLGA8FQ08AF8 430 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 GOLGA8DPQ0D2H9 430 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 PON2Q15165 354 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 SGO2Q562F6 1265 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 PPP1R26Q5T8A7 1209 aaPredicted RBP18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 SPEM1Q8N4L4 309 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 SLC4A11Q8NBS3 891 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 ZMIZ2Q8NF64 920 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 CCDC26Q8TAB7 109 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 RIN3Q8TB24 985 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 CDK5RAP1Q96SZ6 601 aaKnown RBP18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 GMIPQ9P107 970 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 TBC1D14Q9P2M4 693 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 SCML2Q9UQR0 700 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 CPQQ9Y646 472 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 WDR87Q6ZQQ6 2873 aa18.5■□□□□ 0.55
SCARNA2-201ENST00000458748 TRDMT1O14717 391 aaKnown RBP18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 BEST1O76090 585 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 ACO1P21399 889 aaKnown RBP18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 CXCL12P48061 93 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 RAD23BP54727 409 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 KCNH2Q12809 1159 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 LRMPQ12912 555 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 CCINQ13939 588 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 ARHGAP17Q68EM7 881 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 TRIM59Q8IWR1 403 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 ZBTB44Q8NCP5 570 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 ATRIPQ8WXE1 791 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 JAKMIP2Q96AA8 810 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 FAM81BQ96LP2 452 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 ARID3AQ99856 593 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 RNF38Q9H0F5 515 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 WNT6Q9Y6F9 365 aa18.49■□□□□ 0.55
SCARNA2-201ENST00000458748 OTOL1A6NHN0 477 aaPredicted RBP18.48■□□□□ 0.55
SCARNA2-201ENST00000458748 PAPSS2O95340 614 aaPredicted RBP18.48■□□□□ 0.55
SCARNA2-201ENST00000458748 ZDHHC11BP0C7U3 371 aa18.48■□□□□ 0.55
SCARNA2-201ENST00000458748 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
SCARNA2-201ENST00000458748 ARSAP15289 507 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms