RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 COQ4Q9Y3A0 265 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 FANCMQ8IYD8 2048 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 CUL2Q13617 745 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 PPP2R5DQ14738 602 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 PPP1R26Q5T8A7 1209 aaPredicted RBP17.15■□□□□ 0.34
CPSF6-203ENST00000456847 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
CPSF6-203ENST00000456847 EXOC4Q96A65 974 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 TMEM176AQ96HP8 235 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 ECT2Q9H8V3 914 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 PRR23AA6NEV1 266 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 NFATC1O95644 943 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 GNA14O95837 355 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 OLFM2O95897 454 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 CCR3P51677 355 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 CETN1Q12798 172 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 NR1H3Q13133 447 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 EML3Q32P44 896 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 FAM124BQ9H5Z6 455 aaPredicted RBP17.14■□□□□ 0.33
CPSF6-203ENST00000456847 PRMT8Q9NR22 394 aaPredicted RBP17.14■□□□□ 0.33
CPSF6-203ENST00000456847 TLR8Q9NR97 1041 aaKnown RBP17.14■□□□□ 0.33
CPSF6-203ENST00000456847 IL37Q9NZH6 218 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
CPSF6-203ENST00000456847 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 COCHO43405 550 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 FGFR1OPO95684 399 aaKnown RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 ACO1P21399 889 aaKnown RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 TBXAS1P24557 533 aaPredicted RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 RAD23BP54727 409 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 ZNF528Q3MIS6 628 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 Q6ZS52 159 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 ASCL5Q7RTU5 278 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 SLC4A11Q8NBS3 891 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 NT5C1BQ96P26 610 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 SRRTQ9BXP5 876 aaKnown RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 CCSER2Q9H7U1 834 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
CPSF6-203ENST00000456847 GJA4P35212 333 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 ZXDBP98169 803 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 DUSP16Q9BY84 665 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
CPSF6-203ENST00000456847 FAM92AA1XBS5 289 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
CPSF6-203ENST00000456847 CYP26A1O43174 497 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 TUBP50607 506 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 P2RY13Q9BPV8 354 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 LINC00597Q9H2U6 94 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 CLSTN2Q9H4D0 955 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 SH3BP1Q9Y3L3 701 aa17.12■□□□□ 0.33
CPSF6-203ENST00000456847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.12■□□□□ 0.33
CPSF6-203ENST00000456847 HHLA1C9JL84 531 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 TLR5O60602 858 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 IRF1P10914 325 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CD19P15391 556 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CXCL12P48061 93 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SLC8A3P57103 927 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SATB1Q01826 763 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CCINQ13939 588 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 TMEM196Q5HYL7 178 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SCML2Q9UQR0 700 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 TRDMT1O14717 391 aaKnown RBP17.11■□□□□ 0.33
CPSF6-203ENST00000456847 P4HA2O15460 535 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 ZDHHC11BP0C7U3 371 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 GAS6Q14393 721 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SGO2Q562F6 1265 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 ARHGAP17Q68EM7 881 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 FSTL4Q6MZW2 842 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 TRIM59Q8IWR1 403 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 SYNPOQ8N3V7 929 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CD101Q93033 1021 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 CHFRQ96EP1 664 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 ZSCAN32Q9NX65 697 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
CPSF6-203ENST00000456847 EGFP01133 1207 aa17.1■□□□□ 0.33
CPSF6-203ENST00000456847 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
CPSF6-203ENST00000456847 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
CPSF6-203ENST00000456847 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
CPSF6-203ENST00000456847 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
CPSF6-203ENST00000456847 HESX1Q9UBX0 185 aa17.1■□□□□ 0.33
CPSF6-203ENST00000456847 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
CPSF6-203ENST00000456847 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
CPSF6-203ENST00000456847 PMM2O15305 246 aa17.09■□□□□ 0.33
CPSF6-203ENST00000456847 DRD1P21728 446 aa17.09■□□□□ 0.33
CPSF6-203ENST00000456847 GALK1P51570 392 aa17.09■□□□□ 0.33
CPSF6-203ENST00000456847 MARSP56192 900 aaKnown RBP17.09■□□□□ 0.33
CPSF6-203ENST00000456847 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
CPSF6-203ENST00000456847 NAIF1Q69YI7 327 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms