RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 IFRD2Q12894 506 aaPredicted RBP18.81■□□□□ 0.6
FAM239A-203ENST00000456563 WDR59Q6PJI9 974 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 TC2NQ8N9U0 490 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 PDZD8Q8NEN9 1154 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ITFG1Q8TB96 612 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 SHKBP1Q8TBC3 707 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ATXN2LQ8WWM7 1075 aaKnown RBP18.81■□□□□ 0.6
FAM239A-203ENST00000456563 FBXO32Q969P5 355 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 PPP1R13BQ96KQ4 1090 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 GCNAQ96QF7 691 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 CPXM1Q96SM3 734 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ATXN3LQ9H3M9 355 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 CNGB3Q9NQW8 809 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 ZNHIT6Q9NWK9 470 aaKnown RBP18.81■□□□□ 0.6
FAM239A-203ENST00000456563 MYH10P35580 1976 aa18.81■□□□□ 0.6
FAM239A-203ENST00000456563 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 A0A1W2PRU2 124 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 NRG2O14511 850 aaPredicted RBP18.8■□□□□ 0.6
FAM239A-203ENST00000456563 ZBED1O96006 694 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 LCP1P13796 627 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 SNX16P57768 344 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 CLEC16AQ2KHT3 1053 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 PTPN20Q4JDL3 420 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 TDRD12Q587J7 1177 aaKnown RBP18.8■□□□□ 0.6
FAM239A-203ENST00000456563 SNX30Q5VWJ9 437 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 SIX6OS1Q8N1H7 587 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.8■□□□□ 0.6
FAM239A-203ENST00000456563 TRPM5Q9NZQ8 1165 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 ARHGAP20Q9P2F6 1191 aa18.8■□□□□ 0.6
FAM239A-203ENST00000456563 ZNF840PA6NDX5 716 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 SOBPA7XYQ1 873 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 E5RJQ4 531 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 FBXO21O94952 628 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 USP17L7P0C7H9 530 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 GJA1P17302 382 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 GABRB2P47870 512 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 DAOAP59103 153 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 CDK17Q00537 523 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 CENPCQ03188 943 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 GET4Q7L5D6 327 aaPredicted RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 ERICH1Q86X53 443 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 SLC30A5Q8TAD4 765 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 CPA5Q8WXQ8 436 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 IRGQQ8WZA9 623 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 MRPS31Q92665 395 aaKnown RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 PHF7Q9BWX1 381 aaPredicted RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 SEPT11Q9NVA2 429 aaKnown RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 GMIPQ9P107 970 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
FAM239A-203ENST00000456563 ZMYM5Q9UJ78 669 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
FAM239A-203ENST00000456563 DOCK6Q96HP0 2047 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 EYSQ5T1H1 3165 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 SSU72P8A0A1W2PR75 194 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PIK3R2O00459 728 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 DDX3XO00571 662 aaKnown RBP eCLIP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PLEKP08567 350 aaPredicted RBP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 IL9P15248 144 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 CEBPBP17676 345 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 DDX6P26196 483 aaKnown RBP eCLIP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PSEN1P49768 467 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 KCNQ1P51787 676 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 CYP4F8P98187 520 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 TEAD2Q15562 447 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 ARHGAP15Q53QZ3 475 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PPP1R2P3Q6NXS1 205 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 BHLHA9Q7RTU4 235 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 VPS36Q86VN1 386 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 NPAS3Q8IXF0 933 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 ARHGAP18Q8N392 663 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 SPC24Q8NBT2 197 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 MSANTD4Q8NCY6 345 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 FGF13Q92913 245 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PANX2Q96RD6 677 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 MIS12Q9H081 205 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 TASP1Q9H6P5 420 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 TJP2Q9UDY2 1190 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 CDH7Q9ULB5 785 aa18.78■□□□□ 0.6
FAM239A-203ENST00000456563 ZFP37Q9Y6Q3 630 aaPredicted RBP18.78■□□□□ 0.6
FAM239A-203ENST00000456563 PAPSS1O43252 624 aaPredicted RBP18.77■□□□□ 0.6
FAM239A-203ENST00000456563 SART1O43290 800 aaKnown RBP18.77■□□□□ 0.6
FAM239A-203ENST00000456563 ERBB2P04626 1255 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 GZMAP12544 262 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 PFKLP17858 780 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 MMP8P22894 467 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.6
FAM239A-203ENST00000456563 ACAD10Q6JQN1 1059 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 OTOP3Q7RTS5 596 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 SCD5Q86SK9 330 aa18.77■□□□□ 0.6
FAM239A-203ENST00000456563 PHF13Q86YI8 300 aaPredicted RBP18.77■□□□□ 0.6
FAM239A-203ENST00000456563 SCUBE3Q8IX30 993 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms