RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 H0Y858 1186 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 LEFTY2O00292 366 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 ARNTLO00327 626 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 OAS1P00973 400 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 PAEPP09466 180 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 KRT5P13647 590 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 TARSP26639 723 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 SOX9P48436 509 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 MFAP3P55082 362 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 SLC7A9P82251 487 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 GCNT1Q02742 428 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 NR1H3Q13133 447 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 MAN2A1Q16706 1144 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 CCDC183Q5T5S1 534 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 TRIM68Q6AZZ1 485 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 DDX42Q86XP3 938 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 IRF2BP1Q8IU81 584 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 ARHGEF19Q8IW93 802 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 CPA6Q8N4T0 437 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 FAM81BQ96LP2 452 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 FAM83CQ9BQN1 747 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 ANO10Q9NW15 660 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 TSPAN16Q9UKR8 245 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 SCML2Q9UQR0 700 aa19.07■□□□□ 0.64
PDLIM2-215ENST00000456545 HHLA1C9JL84 531 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 MAGEA9P43362 315 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 BCAT1P54687 386 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 ZNF77Q15935 545 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 EXOC3L4Q17RC7 722 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 SNX30Q5VWJ9 437 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 GPRIN1Q7Z2K8 1008 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 RBBP8NLQ8NC74 664 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 UBA3Q8TBC4 463 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 OSCP1Q8WVF1 389 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 KAT5Q92993 513 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 ATP2A3Q93084 1043 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 EXOC4Q96A65 974 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 TUBGCP2Q9BSJ2 902 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 UBXN6Q9BZV1 441 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 CCSER2Q9H7U1 834 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 LMAN1LQ9HAT1 526 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 SPATA6Q9NWH7 488 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 WNT6Q9Y6F9 365 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 MIA3Q5JRA6 1907 aa19.06■□□□□ 0.64
PDLIM2-215ENST00000456545 ZDBF2Q9HCK1 2354 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 FAM92AA1XBS5 289 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 KCNJ18B7U540 433 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 SLC9A3R1O14745 358 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 CYP26A1O43174 497 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 COCHO43405 550 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 TPM2P07951 284 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 RALAP11233 206 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 ARSAP15289 507 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 TCF3P15923 654 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 SLC9A1P19634 815 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 CTHP32929 405 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 USP8P40818 1118 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 KIF11P52732 1056 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 BST2Q10589 180 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 USP4Q13107 963 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 KCNJ12Q14500 433 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 VWA3BQ502W6 1294 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 ENOSF1Q7L5Y1 443 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 TADA2BQ86TJ2 420 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 PIGZQ86VD9 579 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 UBR7Q8N806 425 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 LRRC4Q9HBW1 653 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 CFAP97Q9P2B7 532 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 NAGPAQ9UK23 515 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 SH3BP1Q9Y3L3 701 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 NFE2L3Q9Y4A8 694 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 ZNF318Q5VUA4 2279 aa19.05■□□□□ 0.64
PDLIM2-215ENST00000456545 TLR5O60602 858 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ZDHHC11BP0C7U3 371 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ATP5C1P36542 298 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 PSEN1P49768 467 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 TUBP50607 506 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 PDE4CQ08493 712 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 GOLGA8FQ08AF8 430 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 GOLGA8DPQ0D2H9 430 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 TCF15Q12870 199 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 LRRC32Q14392 662 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 PON2Q15165 354 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ANGPT1Q15389 498 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 STILQ15468 1287 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 STX1AQ16623 288 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ARHGAP44Q17R89 818 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 TRIM65Q6PJ69 517 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 RBM43Q6ZSC3 357 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 C1orf210Q8IVY1 113 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ARHGAP18Q8N392 663 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ENOX1Q8TC92 643 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 LINC00597Q9H2U6 94 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 NDST4Q9H3R1 872 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 ECT2Q9H8V3 914 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 HPS4Q9NQG7 708 aa19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 SAMSN1Q9NSI8 373 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-215ENST00000456545 A0A1W2PQH9 124 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 GTPBP10A4D1E9 387 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 RNF225M0QZC1 329 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms