RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 HPS3Q969F9 1004 aa15.8■□□□□ 0.12
UBE2F-219ENST00000455999 C8orf48Q96LL4 319 aa15.8■□□□□ 0.12
UBE2F-219ENST00000455999 ZNF518BQ9C0D4 1074 aa15.8■□□□□ 0.12
UBE2F-219ENST00000455999 DPEP3Q9H4B8 488 aa15.8■□□□□ 0.12
UBE2F-219ENST00000455999 PILRBQ9UKJ0 227 aa15.8■□□□□ 0.12
UBE2F-219ENST00000455999 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
UBE2F-219ENST00000455999 KNL1Q8NG31 2342 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 NUMA1Q14980 2115 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 A0A0A0MRY4 1105 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 SLC9A3R1O14745 358 aaPredicted RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 TRIM24O15164 1050 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 CST3P01034 146 aaPredicted RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 CFIP05156 583 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 HOXD13P35453 343 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 EIF2DP41214 584 aaKnown RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 FAM193AP78312 1265 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 SIM1P81133 766 aaPredicted RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 SEMA3BQ13214 749 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 PIP4P1Q86T03 277 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 WBP2Q969T9 261 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 ERLEC1Q96DZ1 483 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 CEP295NLQ96MC4 621 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 SLC32A1Q9H598 525 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 HCN2Q9UL51 889 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 NEUROG3Q9Y4Z2 214 aa15.79■□□□□ 0.12
UBE2F-219ENST00000455999 SRPRBQ9Y5M8 271 aaKnown RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 GOLGA4Q13439 2230 aaKnown RBP15.79■□□□□ 0.12
UBE2F-219ENST00000455999 VPS37CA5D8V6 355 aaPredicted RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 ZNF233A6NK53 670 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 ADH1CP00326 375 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 GABRG2P18507 467 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 GNL1P36915 607 aaPredicted RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 GRIA2P42262 883 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 WASP42768 502 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 TNFRSF4P43489 277 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 PPP3CCP48454 512 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 RING1Q06587 406 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 ALCAMQ13740 583 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 HSF5Q4G112 596 aaPredicted RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 PEAR1Q5VY43 1037 aaPredicted RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 TDRD10Q5VZ19 366 aaKnown RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 TRAPPC11Q7Z392 1133 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 OR6B3Q8NGW1 331 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 ZFRQ96KR1 1074 aaKnown RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 SLITRK1Q96PX8 696 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 GTPBP2Q9BX10 602 aaKnown RBP15.78■□□□□ 0.12
UBE2F-219ENST00000455999 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 SNX25Q9H3E2 840 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 EHD2Q9NZN4 543 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 MSRB2Q9Y3D2 182 aa15.78■□□□□ 0.12
UBE2F-219ENST00000455999 CKAP5Q14008 2032 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 COCHO43405 550 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 TULP3O75386 442 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 PTPN1P18031 435 aaKnown RBP15.77■□□□□ 0.12
UBE2F-219ENST00000455999 STAT6P42226 847 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 RPL6Q02878 288 aaKnown RBP15.77■□□□□ 0.12
UBE2F-219ENST00000455999 MIB1Q86YT6 1006 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 WDR49Q8IV35 697 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 BBS7Q8IWZ6 715 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 ETFBKMTQ8IXQ9 262 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 ZNF513Q8N8E2 541 aaPredicted RBP15.77■□□□□ 0.12
UBE2F-219ENST00000455999 KIAA1958Q8N8K9 716 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 RDH13Q8NBN7 331 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 CHORDC1Q9UHD1 332 aaPredicted RBP15.77■□□□□ 0.12
UBE2F-219ENST00000455999 SLC6A14Q9UN76 642 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 LHX6Q9UPM6 363 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 CABIN1Q9Y6J0 2220 aa15.77■□□□□ 0.12
UBE2F-219ENST00000455999 ACACAQ13085 2346 aa15.77■□□□□ 0.11
UBE2F-219ENST00000455999 E2F8A0AVK6 867 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 TBC1D3BA6NDS4 549 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.76■□□□□ 0.11
UBE2F-219ENST00000455999 TAF4O00268 1085 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 DLATP10515 647 aaKnown RBP15.76■□□□□ 0.11
UBE2F-219ENST00000455999 YWHAQP27348 245 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 TXLNAP40222 546 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 ATXN3P54252 364 aaPredicted RBP15.76■□□□□ 0.11
UBE2F-219ENST00000455999 GAD2Q05329 585 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 SURF1Q15526 300 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBE2F-219ENST00000455999 SLC41A1Q8IVJ1 513 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 NUP93Q8N1F7 819 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 CHCHD4Q8N4Q1 142 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 PDILTQ8N807 584 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 SCAMP5Q8TAC9 235 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 FBXO32Q969P5 355 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 KCNK16Q96T55 309 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 ELOVL4Q9GZR5 314 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 CCSER2Q9H7U1 834 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 CAPN10Q9HC96 672 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 CD93Q9NPY3 652 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 TBC1D14Q9P2M4 693 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
UBE2F-219ENST00000455999 DMXL2Q8TDJ6 3036 aa15.76■□□□□ 0.11
UBE2F-219ENST00000455999 SHROOM3Q8TF72 1996 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms