RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 PAIP2Q9BPZ3 127 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CBWD1Q9BRT8 395 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CADM1Q9BY67 442 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IKZF4Q9H2S9 585 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HIPK3Q9H422 1215 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GPAMQ9HCL2 828 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RAB20Q9NX57 234 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DDX56Q9NY93 547 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MYH9P35579 1960 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GSC2O15499 205 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SPAG7O75391 227 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CSDE1O75534 798 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SPAG6O75602 509 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ADRB2P07550 413 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DHRS4L1P0CG22 281 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GARTP22102 1010 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CYP2C18P33260 490 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RPS6KA3P51812 740 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 VCPP55072 806 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TAP1Q03518 808 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CUL3Q13618 768 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLC1A5Q15758 541 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SNRNP35Q16560 246 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DBN1Q16643 649 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRMT5Q32P41 509 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HSDL1Q3SXM5 330 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RNASEH2BQ5TBB1 312 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C6orf163Q5TEZ5 329 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PLEKHA7Q6IQ23 1121 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZNF449Q6P9G9 518 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LVRNQ6Q4G3 990 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GSTA5Q7RTV2 222 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HAUS6Q7Z4H7 955 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NET1Q7Z628 596 aaPredicted RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KSR1Q8IVT5 923 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RAB3IL1Q8TBN0 382 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NCSTNQ92542 709 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KCNN1Q92952 543 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MCUR1Q96AQ8 359 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 UIMC1Q96RL1 719 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MIPEPQ99797 713 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HERPUD2Q9BSE4 406 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KATNAL1Q9BW62 490 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 VCX3BQ9H321 246 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ACSS3Q9H6R3 686 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C17orf75Q9HAS0 396 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 VCX3AQ9NNX9 186 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SLCO1B3Q9NPD5 702 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C1orf112Q9NSG2 853 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ANKEF1Q9NU02 776 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRMT13Q9NUP7 481 aaKnown RBP10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IP6K2Q9UHH9 426 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GRID1Q9ULK0 1009 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C2CD2Q9Y426 696 aa10.47□□□□□ -0.73
CHCHD4P3-201ENST00000455954 E7ESA3 106 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 H0YCG3 227 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GYG2O15488 501 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CHMP2AO43633 222 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ENTPD5O75356 428 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CBX6O95503 412 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 F2P00734 622 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PIM1P11309 404 aaPredicted RBP10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CSF2RAP15509 400 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RARRES1P49788 294 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PSEN2P49810 448 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ARFIP2P53365 341 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 XIAPP98170 497 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RCN2Q14257 317 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RCN1Q15293 331 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRIP13Q15645 432 aaPredicted RBP10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 OASLQ15646 514 aaKnown RBP10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DNAL1Q4LDG9 190 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 THEMIS2Q5TEJ8 643 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 METTL7BQ6UX53 244 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C15orf39Q6ZRI6 1047 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MIER3Q7Z3K6 550 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 VPS52Q8N1B4 723 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 BANPQ8N9N5 519 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RDM1Q8NG50 284 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CYP2W1Q8TAV3 490 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SEMA4DQ92854 862 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PTPRN2Q92932 1015 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 AZIN2Q96A70 460 aa10.46□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GPRASP2Q96D09 838 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms