RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 B3GALNT2Q8NCR0 500 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 OR6B3Q8NGW1 331 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 RLN3Q8WXF3 142 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 FNBP1Q96RU3 617 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 PNKPQ96T60 521 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 ELOVL4Q9GZR5 314 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 XYLT2Q9H1B5 865 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 KIAA1586Q9HCI6 787 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 TMEM9BQ9NQ34 198 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 EHD2Q9NZN4 543 aa9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 MBD1Q9UIS9 605 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 RALYQ9UKM9 306 aaKnown RBP9.4□□□□□ -0.9
DEPDC1B-202ENST00000453022 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
DEPDC1B-202ENST00000453022 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 SLC9A3R1O14745 358 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 KHNYNO15037 678 aaKnown RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 COCHO43405 550 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TOP3BO95985 862 aaKnown RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 MBL2P11226 248 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 ADH5P11766 374 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TNNI1P19237 187 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 CASP1P29466 404 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 DHPSP49366 369 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 MYL6P60660 151 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TNNC1P63316 161 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 ASIC1P78348 528 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 IRX4P78413 519 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 FAM26FQ5R3K3 315 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 DAB2IPQ5VWQ8 1189 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 CNNM4Q6P4Q7 775 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TTC30AQ86WT1 665 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 PLEKHO2Q8TD55 490 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 SCFD1Q8WVM8 642 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 WBP2Q969T9 261 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 DHX58Q96C10 678 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 SLITRK1Q96PX8 696 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 KCNK16Q96T55 309 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TMEM121BQ9BXQ6 578 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 TMEM74BQ9NUR3 256 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 GON4LQ3T8J9 2241 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 UBE4BO95155 1302 aa9.39□□□□□ -0.91
DEPDC1B-202ENST00000453022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 E2F8A0AVK6 867 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 A8MXQ7 604 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 GABBR2O75899 941 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ADH1CP00326 375 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 APODP05090 189 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 PROS1P07225 676 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 FAM163BP0C2L3 166 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 SPINK2P20155 84 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 PTGER3P43115 390 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 CASP4P49662 377 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 CDH8P55286 799 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 FOXC1Q12948 553 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 STK38Q15208 465 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 LY6G5CQ5SRR4 150 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 SHC4Q6S5L8 630 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 PAQR9Q6ZVX9 377 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ARMCX6Q7L4S7 300 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 DDX42Q86XP3 938 aaKnown RBP eCLIP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ETFBKMTQ8IXQ9 262 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 NUP93Q8N1F7 819 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 XXYLT1Q8NBI6 393 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 PIGKQ92643 395 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 FBXO32Q969P5 355 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 SDCBP2Q9H190 292 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 CUEDC2Q9H467 287 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 CCSER2Q9H7U1 834 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 EVLQ9UI08 416 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 FAM208BQ5VWN6 2430 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 PCNX2A6NKB5 2137 aa9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 ATXN2Q99700 1313 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-202ENST00000453022 TCRBV21S2A2A0A5A6 115 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 SPTLC2O15270 562 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 STX6O43752 255 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 PPP6R2O75170 966 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ALDH1A2O94788 518 aa9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-202ENST00000453022 ZDHHC11BP0C7U3 371 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms