RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 SLC35C1Q96A29 364 aa21.6■■□□□ 1.05
UBE2D4-207ENST00000450743 DUSP9Q99956 384 aaKnown RBP21.6■■□□□ 1.05
UBE2D4-207ENST00000450743 DNAI2Q9GZS0 605 aa21.6■■□□□ 1.05
UBE2D4-207ENST00000450743 LINC00597Q9H2U6 94 aa21.6■■□□□ 1.05
UBE2D4-207ENST00000450743 ECT2Q9H8V3 914 aa21.6■■□□□ 1.05
UBE2D4-207ENST00000450743 KIAA1549LQ6ZVL6 1849 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 BIN1O00499 593 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 TRDMT1O14717 391 aaKnown RBP21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 GJA4P35212 333 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 CCR3P51677 355 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 TMEM196Q5HYL7 178 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 SNX30Q5VWJ9 437 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 TTI2Q6NXR4 508 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 CLEC20AQ6ZU45 233 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 FILIP1Q7Z7B0 1213 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 SYNPOQ8N3V7 929 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 ATP2A3Q93084 1043 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 CEP63Q96MT8 703 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 METTL14Q9HCE5 456 aaKnown RBP21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 ZSCAN32Q9NX65 697 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 PCDHGA2Q9Y5H1 932 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 CPQQ9Y646 472 aa21.59■■□□□ 1.05
UBE2D4-207ENST00000450743 LMNAP02545 664 aaKnown RBP21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 ZDHHC11BP0C7U3 371 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 MBL2P11226 248 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 TDGF1P13385 188 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 CXCL12P48061 93 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 UBE2HP62256 183 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 PPP2R5DQ14738 602 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 ZNF394Q53GI3 561 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 HECTD3Q5T447 861 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 FSTL4Q6MZW2 842 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 FOXR2Q6PJQ5 311 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 Q6ZS52 159 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 KIAA1958Q8N8K9 716 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 ZBTB44Q8NCP5 570 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 NELFBQ8WX92 580 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 ARID3AQ99856 593 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 FAM126AQ9BYI3 521 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 FBXO44Q9H4M3 255 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 FAM124BQ9H5Z6 455 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 CISHQ9NSE2 258 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 SMPD4Q9NXE4 827 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 GMIPQ9P107 970 aa21.58■■□□□ 1.05
UBE2D4-207ENST00000450743 HHLA1C9JL84 531 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 SATB1Q01826 763 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 GRSF1Q12849 480 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 NR1H3Q13133 447 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 ATRIPQ8WXE1 791 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 CTNND2Q9UQB3 1225 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 ZNF292O60281 2723 aa21.57■■□□□ 1.04
UBE2D4-207ENST00000450743 GPR179Q6PRD1 2367 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 MYO18AQ92614 2054 aaKnown RBP21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 BICDL2A1A5D9 508 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 COCHO43405 550 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 NFATC1O95644 943 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 FMO5P49326 533 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 TUBP50607 506 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 GALK1P51570 392 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 RAD23BP54727 409 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 CCDC40Q4G0X9 1142 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 PPP1R26Q5T8A7 1209 aaPredicted RBP21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 GPRIN1Q7Z2K8 1008 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 DDX42Q86XP3 938 aaKnown RBP eCLIP21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 SLC4A11Q8NBS3 891 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 JAKMIP2Q96AA8 810 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 TMEM176AQ96HP8 235 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 HEXIM2Q96MH2 286 aaKnown RBP21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 P2RY13Q9BPV8 354 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 DUSP16Q9BY84 665 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 CCSER2Q9H7U1 834 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 FBRSL1Q9HCM7 1045 aaKnown RBP21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 CFAP97Q9P2B7 532 aa21.56■■□□□ 1.04
UBE2D4-207ENST00000450743 LILRB5O75023 590 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 PGFP49763 221 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 NRLP54845 237 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 NAIF1Q69YI7 327 aaPredicted RBP21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 EXOC4Q96A65 974 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 PNPLA8Q9NP80 782 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 TLR8Q9NR97 1041 aaKnown RBP21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 SCML2Q9UQR0 700 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 SPTBN4Q9H254 2564 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 SPAG17Q6Q759 2223 aa21.55■■□□□ 1.04
UBE2D4-207ENST00000450743 SLC9A3R1O14745 358 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 PMM2O15305 246 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 PAPSS2O95340 614 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 EGFP01133 1207 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 ACO1P21399 889 aaKnown RBP21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 DRD1P21728 446 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 STX17P56962 302 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 PAK1Q13153 545 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 CUL2Q13617 745 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 ADGRG2Q8IZP9 1017 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 TRIML1Q8N9V2 468 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 SUMF1Q8NBK3 374 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 CD101Q93033 1021 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 ZFRQ96KR1 1074 aaKnown RBP21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 C2orf42Q9NWW7 574 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 KIAA1468Q9P260 1216 aa21.54■■□□□ 1.04
UBE2D4-207ENST00000450743 CFAP54Q96N23 3096 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms