RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CNTN3Q9P232 1028 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 DDX25Q9UHL0 483 aaKnown RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 TLN1Q9Y490 2541 aaKnown RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
LINC01961-201ENST00000449954 SPTBN1Q01082 2364 aaKnown RBP8.53□□□□□ -1.04
LINC01961-201ENST00000449954 CABIN1Q9Y6J0 2220 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 TRAV19A0A0A6YYK7 116 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 CCDC196A0A1B0GTZ2 297 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ANTXRLA6NF34 631 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ZBTB39O15060 712 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 BCAT2O15382 392 aaPredicted RBP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 LYPLA2O95372 231 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 TYMPP19971 482 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 MAOBP27338 520 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 AARSP49588 968 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 RESTQ13127 1097 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 GAB4Q2WGN9 574 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 HES3Q5TGS1 186 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ATF7IP2Q5U623 682 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 DHX40Q8IX18 779 aaKnown RBP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 MCPH1Q8NEM0 835 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 CADM4Q8NFZ8 388 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 C2orf15Q8WU43 125 aaKnown RBP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 HIC2Q96JB3 615 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ZMAT2Q96NC0 199 aaKnown RBP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ACAP3Q96P50 834 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 NACC1Q96RE7 527 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 KCNMB3Q9NPA1 279 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 RGL1Q9NZL6 768 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 UXTQ9UBK9 157 aaPredicted RBP8.52□□□□□ -1.05
LINC01961-201ENST00000449954 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 ITPR2Q14571 2701 aa8.52□□□□□ -1.05
LINC01961-201ENST00000449954 UTP20O75691 2785 aaKnown RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 E2F8A0AVK6 867 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CLEC18AA5D8T8 446 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 PAPSS1O43252 624 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 SUV39H1O43463 412 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CYP17A1P05093 508 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CD6P30203 668 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 HSPA4P34932 840 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 NAMPTP43490 491 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 RARRES1P49788 294 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 PDE6CP51160 858 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 AFF3P51826 1226 aaKnown RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 EFNA5P52803 228 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 BNC1Q01954 994 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 FBXL19Q6PCT2 694 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CLEC18BQ6UXF7 455 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 USP49Q70CQ1 688 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 DHX32Q7L7V1 743 aaKnown RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 SFTPA1Q8IWL2 248 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 TPH2Q8IWU9 490 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CLEC18CQ8NCF0 446 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 SPPL2BQ8TCT7 592 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 SH3RF2Q8TEC5 729 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 KCNE4Q8WWG9 221 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 IGSF8Q969P0 613 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 C18orf25Q96B23 403 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 LIN37Q96GY3 246 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 NAF1Q96HR8 494 aaKnown RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 DYDC2Q96IM9 177 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 LRRC2Q9BYS8 371 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 MIR1-1HGQ9H1L0 117 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 TTC12Q9H892 705 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 STARD5Q9NSY2 213 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 TNFSF13BQ9Y275 285 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 MAN2B2Q9Y2E5 1009 aa8.51□□□□□ -1.05
LINC01961-201ENST00000449954 TIMM13Q9Y5L4 95 aaPredicted RBP8.51□□□□□ -1.05
LINC01961-201ENST00000449954 A0A1W2PQF6 199 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 K7ENP7 123 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 CITO14578 2027 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 ENC1O14682 589 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 SLC37A4O43826 429 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 DFNA5O60443 496 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 USO1O60763 962 aaKnown RBP8.5□□□□□ -1.05
LINC01961-201ENST00000449954 CSH1P0DML2 217 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 CSH2P0DML3 217 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 ODC1P11926 461 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 MYF5P13349 255 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 NCAM1P13591 858 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 HMGA1P17096 107 aaKnown RBP8.5□□□□□ -1.05
LINC01961-201ENST00000449954 PAX3P23760 479 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 NTSR1P30989 418 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 ERVPABLB-1P60509 514 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 CENPCQ03188 943 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 DMP1Q13316 513 aaPredicted RBP8.5□□□□□ -1.05
LINC01961-201ENST00000449954 ILKQ13418 452 aa8.5□□□□□ -1.05
LINC01961-201ENST00000449954 HDAC1Q13547 482 aaPredicted RBP8.5□□□□□ -1.05
LINC01961-201ENST00000449954 CTTNQ14247 550 aaKnown RBP8.5□□□□□ -1.05
LINC01961-201ENST00000449954 KCNB1Q14721 858 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms