RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 C4orf32Q8N8J7 132 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 PIP4K2CQ8TBX8 421 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 PKMYT1Q99640 499 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 EPAS1Q99814 870 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 MSTO1Q9BUK6 570 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 CD248Q9HCU0 757 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 DPP3Q9NY33 737 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 EHD2Q9NZN4 543 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 TRPM5Q9NZQ8 1165 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 LARSQ9P2J5 1176 aaKnown RBP7.59□□□□□ -1.19
LRRC28-203ENST00000447360 TBC1D14Q9P2M4 693 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 LIMCH1Q9UPQ0 1083 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 STARD13Q9Y3M8 1113 aa7.59□□□□□ -1.19
LRRC28-203ENST00000447360 TNRC6BQ9UPQ9 1833 aaKnown RBP7.59□□□□□ -1.19
LRRC28-203ENST00000447360 PTPRDP23468 1912 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 COL12A1Q99715 3063 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 TEX51A0A1B0GUA7 166 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 OLFM2O95897 454 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 HLA-EP13747 358 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 NDUFV2P19404 249 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 EIF2S3P41091 472 aaKnown RBP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 MAGEA11P43364 429 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 TRAPPC10P48553 1259 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 MYL7Q01449 175 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 GAD2Q05329 585 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 KDSRQ06136 332 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 INTS6LQ5JSJ4 861 aaKnown RBP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 VSTM1Q6UX27 236 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 LRRC69Q6ZNQ3 347 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 DDX42Q86XP3 938 aaKnown RBP eCLIP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 SPATA2LQ8IUW3 424 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 ETFBKMTQ8IXQ9 262 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 TMEM86AQ8N2M4 240 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 OTUB2Q96DC9 234 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 SPATA17Q96L03 361 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 ZNF560Q96MR9 790 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 RNF38Q9H0F5 515 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 GAREM1Q9H706 876 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 ZDHHC4Q9NPG8 344 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 TM7SF3Q9NS93 570 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 DDX43Q9NXZ2 648 aaKnown RBP7.58□□□□□ -1.2
LRRC28-203ENST00000447360 DEC1Q9P2X7 70 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 GTF3C4Q9UKN8 822 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 CYP8B1Q9UNU6 501 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 CPQQ9Y646 472 aa7.58□□□□□ -1.2
LRRC28-203ENST00000447360 KIAA1549LQ6ZVL6 1849 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 PIEZO2Q9H5I5 2752 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 PLXND1Q9Y4D7 1925 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 E2F8A0AVK6 867 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 ZNF840PA6NDX5 716 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 RRP8O43159 456 aaKnown RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 HOXC11O43248 304 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TNFSF14O43557 240 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 HUS1O60921 280 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 CILPO75339 1184 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TULP3O75386 442 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 MAOBP27338 520 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 ITPKBP27987 946 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 PCSK1P29120 753 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 ABCD1P33897 745 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 MATKP42679 507 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 LHX1P48742 406 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 CFHR1Q03591 330 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 PTPRNQ16849 979 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 HLA-BQ31612 363 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TTC38Q5R3I4 469 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 LY6G5CQ5SRR4 150 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 BTBD8Q5XKL5 378 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 FAM171BQ6P995 826 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 C4orf50Q6ZRC1 276 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 DENND5BQ6ZUT9 1274 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 METTL3Q86U44 580 aaKnown RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TMPRSS12Q86WS5 348 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 MARCH9Q86YJ5 346 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 CCDC83Q8IWF9 413 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 SCN4BQ8IWT1 228 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 SYT2Q8N9I0 419 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TERB1Q8NA31 727 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 ENGASEQ8NFI3 743 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 CADM4Q8NFZ8 388 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 IPO4Q8TEX9 1081 aaKnown RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 NXPE2Q96DL1 559 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 MRGPRX1Q96LB2 322 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 FCRL3Q96P31 734 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 GABRG3Q99928 467 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 DUSP9Q99956 384 aaKnown RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 TTLL2Q9BWV7 592 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 FOXP1Q9H334 677 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-203ENST00000447360 PRDM16Q9HAZ2 1276 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 IL21RQ9HBE5 538 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 HCN2Q9UL51 889 aa7.57□□□□□ -1.2
LRRC28-203ENST00000447360 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms