RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 COCHO43405 550 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 MBL2P11226 248 aaPredicted RBP21.99■■□□□ 1.11
SDC1-205ENST00000447124 OPRD1P41143 372 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 PXNP49023 591 aaPredicted RBP21.99■■□□□ 1.11
SDC1-205ENST00000447124 INCA1Q0VD86 236 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 FILIP1Q7Z7B0 1213 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 SPATA20Q8TB22 786 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 OVCA2Q8WZ82 227 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 ZFRQ96KR1 1074 aaKnown RBP21.99■■□□□ 1.11
SDC1-205ENST00000447124 CYP3A43Q9HB55 503 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 TMEM8AQ9HCN3 771 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 COMMD8Q9NX08 183 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 GMIPQ9P107 970 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 CFAP97Q9P2B7 532 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 PCDHA5Q9Y5H7 936 aa21.99■■□□□ 1.11
SDC1-205ENST00000447124 ADORA2BP29275 332 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 PMS1P54277 932 aaKnown RBP21.98■■□□□ 1.11
SDC1-205ENST00000447124 MAP3K7CLP57077 242 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 NR1H3Q13133 447 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 SIM2Q14190 667 aaPredicted RBP21.98■■□□□ 1.11
SDC1-205ENST00000447124 WDR5BQ86VZ2 330 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 KIAA1958Q8N8K9 716 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 PDZD8Q8NEN9 1154 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 WBP2Q969T9 261 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 HNRNPABQ99729 332 aaKnown RBP21.98■■□□□ 1.11
SDC1-205ENST00000447124 CCSER2Q9H7U1 834 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 PARD6AQ9NPB6 346 aa21.98■■□□□ 1.11
SDC1-205ENST00000447124 HHLA1C9JL84 531 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 CETN3O15182 167 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 NFATC1O95644 943 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 GTF2H1P32780 548 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 DHCR24Q15392 516 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 HECTD3Q5T447 861 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 ZNF658Q5TYW1 1059 aaPredicted RBP21.97■■□□□ 1.11
SDC1-205ENST00000447124 KRT39Q6A163 491 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 ANKRD40Q6AI12 368 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 RHBDF2Q6PJF5 856 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 PRR23BQ6ZRT6 265 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 GPRIN1Q7Z2K8 1008 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 CYFIP2Q96F07 1278 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 GSDMAQ96QA5 445 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 NIF3L1Q9GZT8 377 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 MYOFQ9NZM1 2061 aa21.97■■□□□ 1.11
SDC1-205ENST00000447124 GOLGA6L4A6NEF3 574 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 ATG13O75143 517 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CILPO75339 1184 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CYP17A1P05093 508 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CD58P19256 250 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CNR2P34972 360 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 SLC6A11P48066 632 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 FBXO43Q4G163 708 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 COBLL1Q53SF7 1204 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CLEC20AQ6ZU45 233 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 ZC3H3Q8IXZ2 948 aaKnown RBP21.96■■□□□ 1.11
SDC1-205ENST00000447124 RPLP0P6Q8NHW5 317 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 TATDN2Q93075 761 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 CCDC34Q96HJ3 373 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 NT5C1AQ9BXI3 368 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 RMND1Q9NWS8 449 aa21.96■■□□□ 1.11
SDC1-205ENST00000447124 K7EQS6 105 aa21.95■■□□□ 1.1
SDC1-205ENST00000447124 MESP2Q0VG99 397 aa21.95■■□□□ 1.1
SDC1-205ENST00000447124 TIGD1Q96MW7 591 aa21.95■■□□□ 1.1
SDC1-205ENST00000447124 IMPG2Q9BZV3 1241 aa21.95■■□□□ 1.1
SDC1-205ENST00000447124 SLC8A2Q9UPR5 921 aa21.95■■□□□ 1.1
SDC1-205ENST00000447124 HELZP42694 1942 aaKnown RBP21.95■■□□□ 1.1
SDC1-205ENST00000447124 TBX18O95935 607 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 FAM200BP0CF97 657 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 EPB41P11171 864 aaKnown RBP21.94■■□□□ 1.1
SDC1-205ENST00000447124 TUBP50607 506 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 LAIR1Q6GTX8 287 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 SFTPA1Q8IWL2 248 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 SECISBP2LQ93073 1101 aaKnown RBP21.94■■□□□ 1.1
SDC1-205ENST00000447124 EXOC4Q96A65 974 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 OSER1Q9NX31 292 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 RAB20Q9NX57 234 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 GMEB2Q9UKD1 530 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 RAB23Q9ULC3 237 aa21.94■■□□□ 1.1
SDC1-205ENST00000447124 E2F8A0AVK6 867 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 TRIM49BA6NDI0 452 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 SLC9A3R1O14745 358 aaPredicted RBP21.93■■□□□ 1.1
SDC1-205ENST00000447124 RETP07949 1114 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 MXI1P50539 228 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 SPEM2Q0P670 501 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 CBWD6Q4V339 395 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 ZNF394Q53GI3 561 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 CBWD3Q5JTY5 395 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 CBWD5Q5RIA9 395 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 PPP1R26Q5T8A7 1209 aaPredicted RBP21.93■■□□□ 1.1
SDC1-205ENST00000447124 ISM2Q6H9L7 571 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 C12orf40Q86WS4 652 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 DDX42Q86XP3 938 aaKnown RBP eCLIP21.93■■□□□ 1.1
SDC1-205ENST00000447124 GPR161Q8N6U8 529 aaKnown RBP21.93■■□□□ 1.1
SDC1-205ENST00000447124 SMARCE1Q969G3 411 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 JAKMIP2Q96AA8 810 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 FBXO44Q9H4M3 255 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 NMUR1Q9HB89 426 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 DLL3Q9NYJ7 618 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 SCML2Q9UQR0 700 aa21.93■■□□□ 1.1
SDC1-205ENST00000447124 MYH10P35580 1976 aa21.92■■□□□ 1.1
SDC1-205ENST00000447124 CCDC163A0A0D9SF12 145 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms