RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 PABPC5Q96DU9 382 aaKnown RBP10.8□□□□□ -0.68
LIN54-203ENST00000446851 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
LIN54-203ENST00000446851 POMKQ9H5K3 350 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 EHD2Q9NZN4 543 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 NME7Q9Y5B8 376 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 MYH10P35580 1976 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 C2orf78A6NCI8 922 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 KRT3P12035 628 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 RARGP13631 454 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 ATF6P18850 670 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 CDR2Q01850 454 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 PDCLQ13371 301 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 MTF1Q14872 753 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 BSPRYQ5W0U4 402 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 E4F1Q66K89 784 aaPredicted RBP10.8□□□□□ -0.68
LIN54-203ENST00000446851 RWDD4Q6NW29 188 aaKnown RBP10.8□□□□□ -0.68
LIN54-203ENST00000446851 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
LIN54-203ENST00000446851 FMNL3Q8IVF7 1028 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 CRYBG2Q8N1P7 616 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 NAT16Q8N8M0 369 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 RSAD2Q8WXG1 361 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 FGF13Q92913 245 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 CPXM1Q96SM3 734 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 TAS2R14Q9NYV8 317 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 FNIP2Q9P278 1114 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
LIN54-203ENST00000446851 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIN54-203ENST00000446851 H2AFZP0C0S5 128 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 HOXB8P17481 243 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 KPNA1P52294 538 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 PPP6R3Q5H9R7 873 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 H2AFVQ71UI9 128 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ZNF571Q7Z3V5 609 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 TDRD5Q8NAT2 981 aaKnown RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 MRFAP1L1Q96HT8 127 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CDCA3Q99618 268 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 DZANK1Q9NVP4 752 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 UXTQ9UBK9 157 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 CAPN11Q9UMQ6 739 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 YJEFN3A6XGL0 299 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 E7ENQ6 273 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 M0QYT0 321 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 NCK2O43639 380 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 SPOPO43791 374 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 RTN3O95197 1032 aaPredicted RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 GLP2RO95838 553 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 SETSIPP0DME0 302 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 KIF11P52732 1056 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 VCPP55072 806 aaKnown RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 CYP26C1Q6V0L0 522 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 TCEAL8Q8IYN2 117 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CXorf38Q8TB03 319 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.684e-12■■■■■ 27.5
LIN54-203ENST00000446851 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CPQQ9Y646 472 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 A0A087X0T9 212 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 TRAV19A0A0A6YYK7 116 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 FAM228BP0C875 321 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CDC25CP30307 473 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 SDC4P31431 198 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ATP5C1P36542 298 aaKnown RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 AARSP49588 968 aaKnown RBP eCLIP10.79□□□□□ -0.68
LIN54-203ENST00000446851 FAM131BQ86XD5 332 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ACRBPQ8NEB7 543 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 PSMB7Q99436 277 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ZWILCHQ9H900 591 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ZFP14Q9HCL3 533 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 TMEM30AQ9NV96 361 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CEBPBP17676 345 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CD72P21854 359 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 RRM1P23921 792 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 PSMA2P25787 234 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 MTHFRP42898 656 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 SULT1E1P49888 294 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 YWHAGP61981 247 aaKnown RBP eCLIP10.79□□□□□ -0.68
LIN54-203ENST00000446851 SMARCB1Q12824 385 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 ADAM15Q13444 863 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 SYCE2Q6PIF2 218 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 FOXR2Q6PJQ5 311 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 OTOP3Q7RTS5 596 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 APTXQ7Z2E3 356 aaKnown RBP10.79□□□□□ -0.68
LIN54-203ENST00000446851 BTBD6Q96KE9 485 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 CFAP97Q9P2B7 532 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 NAALADL1Q9UQQ1 740 aa10.79□□□□□ -0.68
LIN54-203ENST00000446851 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 MYO1FO00160 1098 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 RNF8O76064 485 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 CDK17Q00537 523 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 HFE2Q6ZVN8 426 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 CACUL1Q86Y37 369 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 DEFB106AQ8N104 65 aa10.78□□□□□ -0.68
LIN54-203ENST00000446851 FLCNQ8NFG4 579 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms