RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DPY19L2P1Q6NXN4 242 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 TRIM72Q6ZMU5 477 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 CCDC186Q7Z3E2 898 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 RNF135Q8IUD6 432 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 CMTM8Q8IZV2 173 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 STK32AQ8WU08 396 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 ASB16Q96NS5 453 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 LHX5Q9H2C1 402 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 CYLDQ9NQC7 956 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 CNGB3Q9NQW8 809 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 SEPT11Q9NVA2 429 aaKnown RBP14.84□□□□□ -0.03
SSBP3-208ENST00000444533 THG1LQ9NWX6 298 aaKnown RBP14.84□□□□□ -0.03
SSBP3-208ENST00000444533 IL37Q9NZH6 218 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 GMIPQ9P107 970 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 CHORDC1Q9UHD1 332 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-208ENST00000444533 NAGPAQ9UK23 515 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 DENND4AQ7Z401 1863 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ZNF840PA6NDX5 716 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 HHLA1C9JL84 531 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ECI2O75521 394 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 LSM8O95777 96 aaKnown RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 CALCAP01258 141 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 WEE1P30291 646 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 RGS7P49802 495 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ASIC2Q16515 512 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 PKDCCQ504Y2 493 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 FAM78AQ5JUQ0 283 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 TAF3Q5VWG9 929 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 SPECC1LQ69YQ0 1117 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 DENND1BQ6P3S1 775 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 RSRC2Q7L4I2 434 aaKnown RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 DDX42Q86XP3 938 aaKnown RBP eCLIP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 PASD1Q8IV76 773 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ARID3BQ8IVW6 561 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 CELF5Q8N6W0 485 aaKnown RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ELSPBP1Q96BH3 223 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 NECAB3Q96P71 396 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 KCNK12Q9HB15 430 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 TDP1Q9NUW8 608 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 SORCS3Q9UPU3 1222 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 LUC7L2Q9Y383 392 aaKnown RBP14.83□□□□□ -0.04
SSBP3-208ENST00000444533 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.04
SSBP3-208ENST00000444533 A0A1W2PQJ5 194 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 FAM92AA1XBS5 289 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 MOSPD3O75425 235 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ALADP13716 330 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ATP5C1P36542 298 aaKnown RBP14.82□□□□□ -0.04
SSBP3-208ENST00000444533 GPD2P43304 727 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 CDR2Q01850 454 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 TDGQ13569 410 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 HTR4Q13639 388 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 RAB41Q5JT25 222 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 STXBP5Q5T5C0 1151 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 SNX30Q5VWJ9 437 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 BTBD8Q5XKL5 378 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 PPP1R2P3Q6NXS1 205 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 PMF1Q6P1K2 205 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 GPRIN1Q7Z2K8 1008 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 TMEM150AQ86TG1 271 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 VPS36Q86VN1 386 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 EPS8L1Q8TE68 723 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 RNF139Q8WU17 664 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 DEPDC1BQ8WUY9 529 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 CPLX3Q8WVH0 158 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 IRGQQ8WZA9 623 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 PPP1R13BQ96KQ4 1090 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ZSWIM1Q9BR11 485 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 SLC46A2Q9BY10 475 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ULBP1Q9BZM6 244 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 RBSNQ9H1K0 784 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 TRPV4Q9HBA0 871 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ACP6Q9NPH0 428 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
SSBP3-208ENST00000444533 ZNHIT6Q9NWK9 470 aaKnown RBP14.82□□□□□ -0.04
SSBP3-208ENST00000444533 OBP2AQ9NY56 170 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 STRIP2Q9ULQ0 834 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 USP3Q9Y6I4 520 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 NUMBLQ9Y6R0 609 aa14.82□□□□□ -0.04
SSBP3-208ENST00000444533 LRRC53A6NM62 1247 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 ANHXE9PGG2 379 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 TLR5O60602 858 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 MBL2P11226 248 aaPredicted RBP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 YWHAGP61981 247 aaKnown RBP eCLIP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 ZBED6P86452 979 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 PDCLQ13371 301 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 PTPN21Q16825 1174 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 C10orf120Q5SQS8 335 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 PARM1Q6UWI2 310 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 NOP9Q86U38 636 aaKnown RBP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 UBALD2Q8IYN6 164 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 SCML4Q8N228 414 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 ARL14EPQ8N8R7 260 aaPredicted RBP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 FAM149B1Q96BN6 582 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 ZSWIM3Q96MP5 696 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 KXD1Q9BQD3 176 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms