RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 HOXA6P31267 233 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 HOXC13P31276 330 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 GALK1P51570 392 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
TREX1-202ENST00000444177 INCA1Q0VD86 236 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 ZNF77Q15935 545 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
TREX1-202ENST00000444177 ERMP1Q7Z2K6 904 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 LONP2Q86WA8 852 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 GPR161Q8N6U8 529 aaKnown RBP14.85□□□□□ -0.03
TREX1-202ENST00000444177 SLC2A14Q8TDB8 520 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 SH3RF2Q8TEC5 729 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 OSCP1Q8WVF1 389 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 SLC35C1Q96A29 364 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 SMARCD1Q96GM5 515 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 TWNKQ96RR1 684 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 NT5C1AQ9BXI3 368 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 LINC00597Q9H2U6 94 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 ECT2Q9H8V3 914 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 TMEM30AQ9NV96 361 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 EHD2Q9NZN4 543 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 RAB23Q9ULC3 237 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 KIF26AQ9ULI4 1882 aaPredicted RBP14.84□□□□□ -0.03
TREX1-202ENST00000444177 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 CILPO75339 1184 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 AP1G2O75843 785 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 TCF3P15923 654 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 PTMSP20962 102 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 TGM1P22735 817 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 ADORA2BP29275 332 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 CNR2P34972 360 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 GJA4P35212 333 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 IFNAR2P48551 515 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 LPAL2Q16609 132 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 ZNF394Q53GI3 561 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 PKN3Q6P5Z2 889 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 FOXR2Q6PJQ5 311 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 FUKQ8N0W3 1084 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 CPA6Q8N4T0 437 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 C12orf29Q8N999 325 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 P2RY13Q9BPV8 354 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 DNAI2Q9GZS0 605 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 NUP62CLQ9H1M0 184 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 DMAP1Q9NPF5 467 aaPredicted RBP14.84□□□□□ -0.03
TREX1-202ENST00000444177 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 ARHGAP26Q9UNA1 814 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 WNT6Q9Y6F9 365 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 GREB1Q4ZG55 1949 aa14.84□□□□□ -0.03
TREX1-202ENST00000444177 ATG13O75143 517 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 EGFP01133 1207 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 PFKLP17858 780 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 DRD1P21728 446 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 PPP3CCP48454 512 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 FMO5P49326 533 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 PDE6CP51160 858 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 SLC5A3P53794 718 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 ZXDBP98169 803 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 USP4Q13107 963 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 SRSF5Q13243 272 aaKnown RBP14.83□□□□□ -0.04
TREX1-202ENST00000444177 SIM2Q14190 667 aaPredicted RBP14.83□□□□□ -0.04
TREX1-202ENST00000444177 PUM1Q14671 1186 aaKnown RBP eCLIP14.83□□□□□ -0.04
TREX1-202ENST00000444177 EML3Q32P44 896 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 NAIF1Q69YI7 327 aaPredicted RBP14.83□□□□□ -0.04
TREX1-202ENST00000444177 LAIR1Q6GTX8 287 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 PRR23BQ6ZRT6 265 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 NUP93Q8N1F7 819 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 CRYBG2Q8N1P7 616 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 ATP2A3Q93084 1043 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 KCNK16Q96T55 309 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 ARID3AQ99856 593 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 SRRTQ9BXP5 876 aaKnown RBP14.83□□□□□ -0.04
TREX1-202ENST00000444177 RNF38Q9H0F5 515 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 ANAPC1Q9H1A4 1944 aa14.83□□□□□ -0.04
TREX1-202ENST00000444177 GNA14O95837 355 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 ABL1P00519 1130 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 RETP07949 1114 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 FAM200BP0CF97 657 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 LRMPQ12912 555 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 TAF10Q12962 218 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 NR1H3Q13133 447 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 RSPO4Q2I0M5 234 aaPredicted RBP14.82□□□□□ -0.04
TREX1-202ENST00000444177 GPT2Q8TD30 523 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 TATDN2Q93075 761 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 EXOC4Q96A65 974 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 FAXDC2Q96IV6 333 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 PARD6AQ9NPB6 346 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 CISHQ9NSE2 258 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 DLL3Q9NYJ7 618 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 RWDD2AQ9UIY3 292 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 COQ4Q9Y3A0 265 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 DNAH14Q0VDD8 3507 aa14.82□□□□□ -0.04
TREX1-202ENST00000444177 LEFTY2O00292 366 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 RNF40O75150 1001 aa14.81□□□□□ -0.04
TREX1-202ENST00000444177 RTN3O95197 1032 aaPredicted RBP14.81□□□□□ -0.04
TREX1-202ENST00000444177 FGFR1OPO95684 399 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms