RNA–Protein interactions for RNA: ENST00000443993.1

AL391056.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL391056.1, Length 2,449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL391056.1-201ENST00000443993 DDX42Q86XP3 938 aaKnown RBP eCLIP11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 KRT222Q8N1A0 295 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM172AQ8WUF8 416 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 ZNF333Q96JL9 665 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 C11orf84Q9BUA3 381 aaPredicted RBP11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 UBXN6Q9BZV1 441 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 ACBD3Q9H3P7 528 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 CSNK1G1Q9HCP0 422 aa11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 R3HDM2Q9Y2K5 976 aaKnown RBP11.63□□□□□ -0.55
AL391056.1-201ENST00000443993 HOXA2O43364 376 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TRAPPC3O43617 180 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 KCNJ1P48048 391 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 MRPS5P82675 430 aaKnown RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 ADCY2Q08462 1091 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 ADCY1Q08828 1119 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 BOLA3Q53S33 107 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 KAZNQ674X7 775 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 DRICH1Q6PGQ1 229 aaPredicted RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SYDE1Q6ZW31 735 aaPredicted RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SIX6OS1Q8N1H7 587 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 KCTD6Q8NC69 237 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 CENPIQ92674 756 aaPredicted RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SCLYQ96I15 445 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 PEBP4Q96S96 227 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TBCBQ99426 244 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SMOQ99835 787 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 NGRNQ9NPE2 291 aaKnown RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 FBXO21O94952 628 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 GAS8O95995 478 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 MATKP42679 507 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 OR1G1P47890 313 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TKTL1P51854 596 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TSPY1Q01534 308 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TLE2Q04725 743 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 SNX1Q13596 522 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TRIM60Q495X7 471 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 RAB41Q5JT25 222 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 ZMIZ2Q8NF64 920 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 OR10T2Q8NGX3 314 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TEKT4Q8WW24 435 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 HSPH1Q92598 858 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 DDX23Q9BUQ8 820 aaKnown RBP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 HPCAL4Q9UM19 191 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 PTPRDP23468 1912 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
AL391056.1-201ENST00000443993 ENDOD1O94919 500 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM153BP0C7A2 387 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 CCL23P55773 120 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 HDAC4P56524 1084 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 YWHAZP63104 245 aaKnown RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 GPS2Q13227 327 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 PPP1R7Q15435 360 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM153CQ494X1 144 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 STRADAQ7RTN6 431 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 CTU1Q7Z7A3 348 aaKnown RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 MREGQ8N565 214 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 CASD1Q96PB1 797 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM153AQ9UHL3 310 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 MDM4O15151 490 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 DAB1O75553 588 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 OAZ2O95190 189 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 LMNB2Q03252 620 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 KRT17Q04695 432 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 TCTN1Q2MV58 587 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 RAB6CQ53S08 254 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 SCYL2Q6P3W7 929 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FBXO46Q6PJ61 603 aaPredicted RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 BBS12Q6ZW61 710 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM149B1Q96BN6 582 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 MRPL9Q9BYD2 267 aaKnown RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 PPP1R12CQ9BZL4 782 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 FAM129AQ9BZQ8 928 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 RAB6CQ9H0N0 254 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 NEUROG2Q9H2A3 272 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 PNPLA8Q9NP80 782 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 PRG3Q9Y2Y8 225 aaPredicted RBP11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 MICAL3Q7RTP6 2002 aa11.61□□□□□ -0.55
AL391056.1-201ENST00000443993 SYN3O14994 580 aa11.6□□□□□ -0.55
AL391056.1-201ENST00000443993 LIASO43766 372 aa11.6□□□□□ -0.55
AL391056.1-201ENST00000443993 CD48P09326 243 aa11.6□□□□□ -0.55
AL391056.1-201ENST00000443993 RPL21P46778 160 aaKnown RBP11.6□□□□□ -0.55
AL391056.1-201ENST00000443993 NDUFV1P49821 464 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms