RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DNASE1L2Q92874 299 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 IRF7Q92985 503 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 USP13Q92995 863 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 ERGIC2Q96RQ1 377 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 TRPC7Q9HCX4 862 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 C11orf16Q9NQ32 467 aa15.86■□□□□ 0.13
CSNK1E-210ENST00000442216 C2orf78A6NCI8 922 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 CHADO15335 359 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 PRAMEF12O95522 483 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 CKMP06732 381 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 BRD2P25440 801 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 TPM4P67936 248 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 SLC7A9P82251 487 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ARHGAP29Q52LW3 1261 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 HECTD3Q5T447 861 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 YAF2Q8IY57 180 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 SCML4Q8N228 414 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ARL14EPQ8N8R7 260 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ST13P5Q8NFI4 369 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 SLC35F5Q8WV83 523 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ZNF606Q8WXB4 792 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 RSPRY1Q96DX4 576 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ZSWIM1Q9BR11 485 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 LSM14BQ9BX40 385 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 NAA15Q9BXJ9 866 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 BRD9Q9H8M2 597 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 THG1LQ9NWX6 298 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 CHORDC1Q9UHD1 332 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 FBXL21Q9UKT6 434 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 ARHGAP26Q9UNA1 814 aa15.85■□□□□ 0.13
CSNK1E-210ENST00000442216 MUC3AQ02505 3323 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 ZNF263O14978 683 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 CFHP08603 1231 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 ATP1A3P13637 1013 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 GNA15P30679 374 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 USP8P40818 1118 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 MLLT6P55198 1093 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 BPIFB4P59827 614 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 UBXN1Q04323 297 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 PTK2Q05397 1052 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 GRM2Q14416 872 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 FAM71AQ8IYT1 594 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 ARHGAP18Q8N392 663 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 UBA3Q8TBC4 463 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 HSFY1Q96LI6 401 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 SLC22A12Q96S37 553 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 CYP2S1Q96SQ9 504 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 STK33Q9BYT3 514 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 LRRC4Q9HBW1 653 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 CBX8Q9HC52 389 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 CYLDQ9NQC7 956 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 GMIPQ9P107 970 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 AJAP1Q9UKB5 411 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 SIK3Q9Y2K2 1263 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
CSNK1E-210ENST00000442216 M0QYV0 167 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 FOXN3O00409 490 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 ABL1P00519 1130 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 GDI1P31150 447 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 CLCN1P35523 988 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 PRKCQQ04759 706 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 USP4Q13107 963 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 RAPGEF1Q13905 1077 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 ZNF77Q15935 545 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 FILIP1LQ4L180 1135 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 PM20D1Q6GTS8 502 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 KLHDC10Q6PID8 442 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 DDX42Q86XP3 938 aaKnown RBP eCLIP15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 STK32AQ8WU08 396 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 PBXIP1Q96AQ6 731 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 SHDQ96IW2 340 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 LRRC3BQ96PB8 259 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 CDK5RAP1Q96SZ6 601 aaKnown RBP15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 RNF38Q9H0F5 515 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 GANQ9H2C0 597 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 CLIC5Q9NZA1 410 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 PCDHGC3Q9UN70 934 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 MIA3Q5JRA6 1907 aa15.83■□□□□ 0.12
CSNK1E-210ENST00000442216 TULP2O00295 520 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 ARNTLO00327 626 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 CYP26A1O43174 497 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 THAP12O43422 761 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 ZBED1O96006 694 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 GLULP15104 373 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 GPD2P43304 727 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 RPL34P49207 117 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 TKTL1P51854 596 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 SYCP1Q15431 976 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 SLC44A4Q53GD3 710 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 TADA2BQ86TJ2 420 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 LRFN3Q9BTN0 628 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 SMG9Q9H0W8 520 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 ARHGEF3Q9NR81 526 aa15.82■□□□□ 0.12
CSNK1E-210ENST00000442216 KRBA1A5PL33 1030 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms