RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RTN3O95197 1032 aaPredicted RBP12.19□□□□□ -0.46
IRF1-204ENST00000439555 VNN1O95497 513 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 ARSAP15289 507 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 RPL13P26373 211 aaKnown RBP12.19□□□□□ -0.46
IRF1-204ENST00000439555 IFNAR2P48551 515 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 USP46P62068 366 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 EML3Q32P44 896 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 TRIM68Q6AZZ1 485 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 Q6ZS52 159 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
IRF1-204ENST00000439555 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 NUP93Q8N1F7 819 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 CRYBG2Q8N1P7 616 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 PDZD8Q8NEN9 1154 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 SH3RF2Q8TEC5 729 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 CHFRQ96EP1 664 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 DPEP3Q9H4B8 488 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 THADAQ6YHU6 1953 aa12.19□□□□□ -0.46
IRF1-204ENST00000439555 ANKRD11Q6UB99 2663 aaPredicted RBP12.19□□□□□ -0.46
IRF1-204ENST00000439555 FAM92AA1XBS5 289 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 RPP40O75818 363 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 CEACAM1P13688 526 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 GJA4P35212 333 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 GALK1P51570 392 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 VAMP7P51809 220 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 CDH8P55286 799 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 DLG4P78352 724 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 TAF10Q12962 218 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 C1orf220Q5T0J3 134 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 RNF43Q68DV7 783 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 DDX42Q86XP3 938 aaKnown RBP eCLIP12.18□□□□□ -0.46
IRF1-204ENST00000439555 CAMKK1Q8N5S9 505 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
IRF1-204ENST00000439555 P2RY13Q9BPV8 354 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 SMYD3Q9H7B4 428 aa12.18□□□□□ -0.46
IRF1-204ENST00000439555 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
IRF1-204ENST00000439555 CLDN5O00501 218 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
IRF1-204ENST00000439555 TNFRSF10BO14763 440 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 NFATC1O95644 943 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 NR2F2P24468 414 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 YWHAQP27348 245 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 GTF2H1P32780 548 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PSMC2P35998 433 aaKnown RBP12.17□□□□□ -0.46
IRF1-204ENST00000439555 TUBP50607 506 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 CACNA2D1P54289 1103 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 EDRF1Q3B7T1 1238 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 ZCWPW2Q504Y3 356 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PSAPL1Q6NUJ1 521 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PAQR9Q6ZVX9 377 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 GATA6Q92908 595 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
IRF1-204ENST00000439555 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 SDCBP2Q9H190 292 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 CYP3A43Q9HB55 503 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
IRF1-204ENST00000439555 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PKD1L2Q7Z442 2459 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
IRF1-204ENST00000439555 PI4KAP42356 2102 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
IRF1-204ENST00000439555 LEFTY2O00292 366 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 HLA-DRAP01903 254 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 KRT13P13646 458 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 CSRP1P21291 193 aaKnown RBP12.16□□□□□ -0.46
IRF1-204ENST00000439555 MPLP40238 635 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 ASPAP45381 313 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
IRF1-204ENST00000439555 ZXDBP98169 803 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 ADAM9Q13443 819 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 BECN1Q14457 450 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 COBLL1Q53SF7 1204 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 DAB2IPQ5VWQ8 1189 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 KBTBD6Q86V97 674 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 ADGRG2Q8IZP9 1017 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 CD101Q93033 1021 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
IRF1-204ENST00000439555 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms