RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ARMCX1Q9P291 453 aa16.04■□□□□ 0.16
APP-208ENST00000439274 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
APP-208ENST00000439274 FAM237BA0A1B0GVD1 139 aa16.03■□□□□ 0.16
APP-208ENST00000439274 H7C0C1 242 aa16.03■□□□□ 0.16
APP-208ENST00000439274 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
APP-208ENST00000439274 M0QYV0 167 aa16.03■□□□□ 0.16
APP-208ENST00000439274 GSC2O15499 205 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CCDC22O60826 627 aa16.03■□□□□ 0.16
APP-208ENST00000439274 PDHA1P08559 390 aa16.03■□□□□ 0.16
APP-208ENST00000439274 PCK1P35558 622 aa16.03■□□□□ 0.16
APP-208ENST00000439274 ATP5OP48047 213 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CDK16Q00536 496 aa16.03■□□□□ 0.16
APP-208ENST00000439274 ZNF667Q5HYK9 610 aa16.03■□□□□ 0.16
APP-208ENST00000439274 FAM160B1Q5W0V3 765 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CAPRIN2Q6IMN6 1127 aaKnown RBP16.03■□□□□ 0.16
APP-208ENST00000439274 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
APP-208ENST00000439274 MPZL3Q6UWV2 235 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CTAGE3PQ8IX95 158 aa16.03■□□□□ 0.16
APP-208ENST00000439274 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
APP-208ENST00000439274 NSL1Q96IY1 281 aa16.03■□□□□ 0.16
APP-208ENST00000439274 ADPGKQ9BRR6 497 aa16.03■□□□□ 0.16
APP-208ENST00000439274 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
APP-208ENST00000439274 RAB6BQ9NRW1 208 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
APP-208ENST00000439274 FZD9O00144 591 aa16.03■□□□□ 0.16
APP-208ENST00000439274 MYL2P10916 166 aa16.03■□□□□ 0.16
APP-208ENST00000439274 SERPINB4P48594 390 aa16.03■□□□□ 0.16
APP-208ENST00000439274 SLC18A2Q05940 514 aa16.03■□□□□ 0.16
APP-208ENST00000439274 PTPN11Q06124 597 aaPredicted RBP16.03■□□□□ 0.16
APP-208ENST00000439274 KPNB1Q14974 876 aaKnown RBP16.03■□□□□ 0.16
APP-208ENST00000439274 NOMO1Q15155 1222 aa16.03■□□□□ 0.16
APP-208ENST00000439274 ATF7IP2Q5U623 682 aa16.03■□□□□ 0.16
APP-208ENST00000439274 IER5Q5VY09 327 aa16.03■□□□□ 0.16
APP-208ENST00000439274 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
APP-208ENST00000439274 ALYREFQ86V81 257 aaKnown RBP16.03■□□□□ 0.16
APP-208ENST00000439274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.03■□□□□ 0.16
APP-208ENST00000439274 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
APP-208ENST00000439274 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
APP-208ENST00000439274 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
APP-208ENST00000439274 SOWAHBA6NEL2 793 aa16.02■□□□□ 0.16
APP-208ENST00000439274 ZBTB42B2RXF5 422 aa16.02■□□□□ 0.16
APP-208ENST00000439274 TRIM49D1C9J1S8 452 aa16.02■□□□□ 0.16
APP-208ENST00000439274 E7ENQ6 273 aa16.02■□□□□ 0.16
APP-208ENST00000439274 GYG2O15488 501 aa16.02■□□□□ 0.16
APP-208ENST00000439274 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.16
APP-208ENST00000439274 KRT36O76013 467 aa16.02■□□□□ 0.16
APP-208ENST00000439274 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
APP-208ENST00000439274 CPA2P48052 419 aa16.02■□□□□ 0.16
APP-208ENST00000439274 SURF1Q15526 300 aa16.02■□□□□ 0.16
APP-208ENST00000439274 CHSY1Q86X52 802 aa16.02■□□□□ 0.16
APP-208ENST00000439274 TRIM56Q9BRZ2 755 aaKnown RBP16.02■□□□□ 0.16
APP-208ENST00000439274 BCO2Q9BYV7 579 aa16.02■□□□□ 0.16
APP-208ENST00000439274 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
APP-208ENST00000439274 ZNF395Q9H8N7 513 aaPredicted RBP16.02■□□□□ 0.16
APP-208ENST00000439274 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
APP-208ENST00000439274 PTPRHQ9HD43 1115 aa16.02■□□□□ 0.16
APP-208ENST00000439274 HOXC10Q9NYD6 342 aa16.02■□□□□ 0.16
APP-208ENST00000439274 C19orf81C9J6K1 198 aa16.02■□□□□ 0.15
APP-208ENST00000439274 B4GALT4O60513 344 aa16.02■□□□□ 0.15
APP-208ENST00000439274 UGT1A9O60656 530 aa16.02■□□□□ 0.15
APP-208ENST00000439274 ARIH2O95376 493 aa16.02■□□□□ 0.15
APP-208ENST00000439274 ITGB3P05106 788 aa16.02■□□□□ 0.15
APP-208ENST00000439274 PROZP22891 400 aa16.02■□□□□ 0.15
APP-208ENST00000439274 YWHAZP63104 245 aaKnown RBP16.02■□□□□ 0.15
APP-208ENST00000439274 RCN1Q15293 331 aa16.02■□□□□ 0.15
APP-208ENST00000439274 ACSBG2Q5FVE4 666 aa16.02■□□□□ 0.15
APP-208ENST00000439274 SEPT1Q8WYJ6 367 aa16.02■□□□□ 0.15
APP-208ENST00000439274 MCRS1Q96EZ8 462 aa16.02■□□□□ 0.15
APP-208ENST00000439274 SRPK1Q96SB4 655 aaKnown RBP16.02■□□□□ 0.15
APP-208ENST00000439274 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.15
APP-208ENST00000439274 DCLRE1BQ9H816 532 aa16.02■□□□□ 0.15
APP-208ENST00000439274 UGT1A7Q9HAW7 530 aa16.02■□□□□ 0.15
APP-208ENST00000439274 UGT1A10Q9HAW8 530 aa16.02■□□□□ 0.15
APP-208ENST00000439274 UGT1A8Q9HAW9 530 aa16.02■□□□□ 0.15
APP-208ENST00000439274 CNTN3Q9P232 1028 aa16.02■□□□□ 0.15
APP-208ENST00000439274 WDR35Q9P2L0 1181 aa16.02■□□□□ 0.15
APP-208ENST00000439274 MTO1Q9Y2Z2 717 aaKnown RBP16.02■□□□□ 0.15
APP-208ENST00000439274 TTLL3Q9Y4R7 772 aa16.02■□□□□ 0.15
APP-208ENST00000439274 CCDC195A0A1B0GUA6 201 aa16.01■□□□□ 0.15
APP-208ENST00000439274 KCNN4O15554 427 aa16.01■□□□□ 0.15
APP-208ENST00000439274 C1QAP02745 245 aa16.01■□□□□ 0.15
APP-208ENST00000439274 ATP6V1C1P21283 382 aa16.01■□□□□ 0.15
APP-208ENST00000439274 BMPR2Q13873 1038 aa16.01■□□□□ 0.15
APP-208ENST00000439274 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
APP-208ENST00000439274 CES4AQ5XG92 561 aa16.01■□□□□ 0.15
APP-208ENST00000439274 TSHZ1Q6ZSZ6 1077 aa16.01■□□□□ 0.15
APP-208ENST00000439274 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
APP-208ENST00000439274 NMUR2Q9GZQ4 415 aa16.01■□□□□ 0.15
APP-208ENST00000439274 CDT1Q9H211 546 aa16.01■□□□□ 0.15
APP-208ENST00000439274 PLAC1Q9HBJ0 212 aa16.01■□□□□ 0.15
APP-208ENST00000439274 TAS2R1Q9NYW7 299 aa16.01■□□□□ 0.15
APP-208ENST00000439274 HEY1Q9Y5J3 304 aa16.01■□□□□ 0.15
APP-208ENST00000439274 FCHO1O14526 889 aa16.01■□□□□ 0.15
APP-208ENST00000439274 COPEO14579 308 aa16.01■□□□□ 0.15
APP-208ENST00000439274 HNRNPCL1O60812 293 aaKnown RBP16.01■□□□□ 0.15
APP-208ENST00000439274 IQCF3P0C7M6 154 aa16.01■□□□□ 0.15
APP-208ENST00000439274 TSHRP16473 764 aa16.01■□□□□ 0.15
APP-208ENST00000439274 GPD2P43304 727 aa16.01■□□□□ 0.15
APP-208ENST00000439274 CCNHP51946 323 aaPredicted RBP16.01■□□□□ 0.15
APP-208ENST00000439274 TREML2Q5T2D2 321 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms