RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 SQORQ9Y6N5 450 aa4.86□□□□□ -1.63
UPP2-IT1-201ENST00000439185 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 CRYABP02511 175 aaKnown RBP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 PSG1P11464 419 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 PRKAR1BP31321 381 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 THBS3P49746 956 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 DIO1P49895 249 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ARFIP2P53365 341 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 BCAT1P54687 386 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ID2Q02363 134 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 LARS2Q15031 903 aaKnown RBP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 SEC23BQ15437 767 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 RANBP10Q6VN20 620 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ZNF548Q8NEK5 533 aaPredicted RBP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 KBTBD7Q8WVZ9 684 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 CTHRC1Q96CG8 243 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 IP6K2Q9UHH9 426 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 USP22Q9UPT9 525 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 SHROOM4Q9ULL8 1493 aa4.85□□□□□ -1.63
UPP2-IT1-201ENST00000439185 TMEM233B4DJY2 109 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 OFD1O75665 1012 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 PF4V1P10720 104 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 NPR1P16066 1061 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 CREB1P16220 341 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ME1P48163 572 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ZNF267Q14586 743 aaPredicted RBP4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ANO7Q6IWH7 933 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 DEF8Q6ZN54 512 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 DCDC5Q6ZRR9 648 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 C9orf47Q6ZRZ4 202 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 PIM3Q86V86 326 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 OR6B3Q8NGW1 331 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 MAFAQ8NHW3 353 aaPredicted RBP4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 DNAJB14Q8TBM8 379 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 LYZL4Q96KX0 146 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 SNX15Q9NRS6 342 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 MGAT4CQ9UBM8 478 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ANKRD6Q9Y2G4 727 aa4.84□□□□□ -1.63
UPP2-IT1-201ENST00000439185 ANKRD62A6NC57 917 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 M0R3H8 397 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 AP1G1O43747 822 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TBC1D4O60343 1298 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CTSAP10619 480 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NCLP19338 710 aaKnown RBP4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HTR1BP28222 390 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HTR6P50406 440 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CFHR1Q03591 330 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SRSF1Q07955 248 aaKnown RBP eCLIP4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 BRDTQ58F21 947 aaPredicted RBP4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TMEM63BQ5T3F8 832 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DENND2CQ68D51 928 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 LINC01465Q8N7H1 131 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HS6ST2Q96MM7 605 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NT5C1BQ96P26 610 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HOMER2Q9NSB8 354 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 COL4A3BPQ9Y5P4 624 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HS3ST3B1Q9Y662 390 aa4.83□□□□□ -1.64
UPP2-IT1-201ENST00000439185 A0A1W2PPL8 197 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SPRY2O43597 315 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 KITP10721 976 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ATF7P17544 494 aaPredicted RBP4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 EPHA3P29320 983 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 UQCRC1P31930 480 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 THBS4P35443 961 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SEMA3AQ14563 771 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 COLCA1Q6ZS62 124 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DAAM2Q86T65 1068 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SMRP1Q8NCR6 262 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DIS3LQ8TF46 1054 aaKnown RBP4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DPH1Q9BZG8 443 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 BRINP2Q9C0B6 783 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 PCDH12Q9NPG4 1184 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CDY1Q9Y6F8 540 aa4.82□□□□□ -1.64
UPP2-IT1-201ENST00000439185 RGS10O43665 173 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SRGAP2O75044 1071 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CNOT3O75175 753 aaKnown RBP4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 MTHFSP49914 203 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TIRAPP58753 221 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 RPS13P62277 151 aaKnown RBP4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 RAB32Q13637 225 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 KCNB1Q14721 858 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 PTPROQ16827 1216 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZDHHC24Q6UX98 284 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DENND1CQ8IV53 801 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms