RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NDUFAF2Q8N183 169 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 NETO2Q8NC67 525 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ADAM32Q8TC27 787 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 NCSTNQ92542 709 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 OLFM3Q96PB7 478 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CCDC106Q9BWC9 280 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 PCDH9Q9HC56 1237 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 AVENQ9NQS1 362 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 MAD1L1Q9Y6D9 718 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 SNCAIPQ9Y6H5 919 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ATP2B4P23634 1241 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 STIP1P31948 543 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 STAT2P52630 851 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 C6orf52Q5T4I8 152 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 DNAJC24Q6P3W2 148 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 TRMT10BQ6PF06 316 aaKnown RBP13.93□□□□□ -0.18
ACTN1-204ENST00000438964 RFX6Q8HWS3 928 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 PGBD4Q96DM1 585 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 IFT122Q9HBG6 1241 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 SMYD2Q9NRG4 433 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
ACTN1-204ENST00000438964 CLPTM1O96005 669 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TCN1P20061 433 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-204ENST00000438964 RPL10P27635 214 aaKnown RBP13.92□□□□□ -0.18
ACTN1-204ENST00000438964 CPOXP36551 454 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 CHN2P52757 468 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 GTF2BQ00403 316 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 C1orf228Q6PIY5 440 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 SESTD1Q86VW0 696 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 CRLF3Q8IUI8 442 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 PHTF2Q8N3S3 785 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TMEM161BQ8NDZ6 487 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 GRIN3AQ8TCU5 1115 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 DTNBP1Q96EV8 351 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 MRPL47Q9HD33 250 aaKnown RBP13.92□□□□□ -0.18
ACTN1-204ENST00000438964 PNPOQ9NVS9 261 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 SOX13Q9UN79 622 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 F8W8V4 182 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 H3BSA7 217 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TFAP2AP05549 437 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TFPTP0C1Z6 253 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 SMIM18P0DKX4 95 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 CRADDP78560 199 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 HPCAP84074 193 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 MAP7D3Q8IWC1 876 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 ABRAQ8N0Z2 381 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 JOSD2Q8TAC2 188 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 TDRD3Q9H7E2 651 aaKnown RBP13.92□□□□□ -0.18
ACTN1-204ENST00000438964 CNTN3Q9P232 1028 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 HBS1LQ9Y450 684 aaKnown RBP13.92□□□□□ -0.18
ACTN1-204ENST00000438964 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
ACTN1-204ENST00000438964 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 NFIBO00712 420 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 HSPA1LP34931 641 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 RFC1P35251 1148 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CRKP46108 304 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 AMIGO2Q86SJ2 522 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CPNE9Q8IYJ1 553 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 KIAA0319LQ8IZA0 1049 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 ATXN7L3BQ96GX2 97 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 ZNF778Q96MU6 729 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 PARVAQ9NVD7 372 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 A0A0B4J269 797 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CFLARO15519 480 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 SLC26A4O43511 780 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 RBP3P10745 1247 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CIAPIN1Q6FI81 312 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 UGT2A3Q6UWM9 527 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 ICA1LQ8NDH6 482 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 OR5B17Q8NGF7 314 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 MRPL1Q9BYD6 325 aaKnown RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 ZC3H12CQ9C0D7 883 aaKnown RBP13.91□□□□□ -0.18
ACTN1-204ENST00000438964 NYAP2Q9P242 653 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
ACTN1-204ENST00000438964 E9PBE3 544 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DCXO43602 365 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 KLHL41O60662 606 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms