RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FAM204AQ9H8W3 233 aa22.12■■□□□ 1.13
PTPRF-207ENST00000436724 TMEM161AQ9NX61 479 aa22.12■■□□□ 1.13
PTPRF-207ENST00000436724 AP1G2O75843 785 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 KDELR1P24390 212 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 PCK1P35558 622 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 ACTN2P35609 894 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 ACADSBP45954 432 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 SCYL2Q6P3W7 929 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 COLGALT2Q8IYK4 626 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 OR10T2Q8NGX3 314 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 SMOQ99835 787 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 PRG3Q9Y2Y8 225 aaPredicted RBP22.11■■□□□ 1.13
PTPRF-207ENST00000436724 CYP11A1P05108 521 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 PCSK1P29120 753 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 OR1G1P47890 313 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 ADCY1Q08828 1119 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 METTL23Q86XA0 190 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 ZMIZ2Q8NF64 920 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 URGCPQ8TCY9 931 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 SUSD3Q96L08 255 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 CYLDQ9NQC7 956 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 TMLHEQ9NVH6 421 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 RASAL2Q9UJF2 1139 aa22.11■■□□□ 1.13
PTPRF-207ENST00000436724 DPYSL4O14531 572 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 ECEL1O95672 775 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 ATXN1P54253 815 aaKnown RBP22.1■■□□□ 1.13
PTPRF-207ENST00000436724 COPS2P61201 443 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 DYNLT1P63172 113 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 SLC39A5Q6ZMH5 540 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 GPRIN1Q7Z2K8 1008 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 KCTD6Q8NC69 237 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 DIS3LQ8TF46 1054 aaKnown RBP22.1■■□□□ 1.13
PTPRF-207ENST00000436724 MYLPFQ96A32 169 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 HIPK3Q9H422 1215 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 SAE1Q9UBE0 346 aaPredicted RBP22.1■■□□□ 1.13
PTPRF-207ENST00000436724 HCSTQ9UBK5 93 aa22.1■■□□□ 1.13
PTPRF-207ENST00000436724 LAMA2P24043 3122 aaKnown RBP22.1■■□□□ 1.13
PTPRF-207ENST00000436724 TJP3O95049 919 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CAPN2P17655 700 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 RPL21P46778 160 aaKnown RBP22.09■■□□□ 1.13
PTPRF-207ENST00000436724 FAAP100Q0VG06 881 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 OVOS1Q6IE37 1185 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CTU1Q7Z7A3 348 aaKnown RBP22.09■■□□□ 1.13
PTPRF-207ENST00000436724 LRRTM3Q86VH5 581 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CMASQ8NFW8 434 aaPredicted RBP22.09■■□□□ 1.13
PTPRF-207ENST00000436724 FAM149B1Q96BN6 582 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CCDC114Q96M63 670 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 ACBD6Q9BR61 282 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 LRRC4Q9HBW1 653 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 FAM114A2Q9NRY5 505 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.09■■□□□ 1.13
PTPRF-207ENST00000436724 PRPSAP2O60256 369 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 HDAC4P56524 1084 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 KRT17Q04695 432 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 PPP1R7Q15435 360 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 TRIP13Q15645 432 aaPredicted RBP22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CCNG2Q16589 344 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 TRIM60Q495X7 471 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 SEPT8Q92599 483 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CALN1Q9BXU9 219 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 GPATCH2LQ9NWQ4 482 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 PCDHB7Q9Y5E2 793 aa22.09■■□□□ 1.13
PTPRF-207ENST00000436724 CYP2C18P33260 490 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 PTPN7P35236 360 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 TKTL1P51854 596 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 BCAR1P56945 870 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 TLE2Q04725 743 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 INTS6LQ5JSJ4 861 aaKnown RBP22.08■■□□□ 1.13
PTPRF-207ENST00000436724 EIF1ADQ8N9N8 165 aaKnown RBP22.08■■□□□ 1.13
PTPRF-207ENST00000436724 KCTD13Q8WZ19 329 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 GRHL1Q9NZI5 618 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 DNPEPQ9ULA0 475 aa22.08■■□□□ 1.13
PTPRF-207ENST00000436724 PLTPP55058 493 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 MMRN1Q13201 1228 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 FAM171BQ6P995 826 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 ANKRD33Q7Z3H0 272 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 DEFB128Q7Z7B8 93 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 ABI1Q8IZP0 508 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 RUNDC3BQ96NL0 473 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 FAM193BQ96PV7 902 aaPredicted RBP22.08■■□□□ 1.12
PTPRF-207ENST00000436724 C11orf84Q9BUA3 381 aaPredicted RBP22.08■■□□□ 1.12
PTPRF-207ENST00000436724 DSEQ9UL01 958 aa22.08■■□□□ 1.12
PTPRF-207ENST00000436724 BDNFP23560 247 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 MRPS5P82675 430 aaKnown RBP22.07■■□□□ 1.12
PTPRF-207ENST00000436724 ZC3H12AQ5D1E8 599 aaKnown RBP22.07■■□□□ 1.12
PTPRF-207ENST00000436724 HFE2Q6ZVN8 426 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 PRUNE1Q86TP1 453 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 DEFB106AQ8N104 65 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 SIX6OS1Q8N1H7 587 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 SLCO2A1Q92959 643 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 PKMYT1Q99640 499 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 ZDHHC18Q9NUE0 388 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 KANSL3Q9P2N6 904 aa22.07■■□□□ 1.12
PTPRF-207ENST00000436724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.06■■□□□ 1.12
PTPRF-207ENST00000436724 NRP1O14786 923 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 CST8O60676 142 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 SCNN1AP37088 669 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 CDH6P55285 790 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 PITX1P78337 314 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms