RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 MED24O75448 989 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 CAVIN2O95810 425 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 MCF2P10911 925 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 RPA1P27694 616 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 PXNP49023 591 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 MCM2P49736 904 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 YWHAHQ04917 246 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 ZNF568Q3ZCX4 644 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 FBXO43Q4G163 708 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 LRSAM1Q6UWE0 723 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 GAREM2Q75VX8 874 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 GATA6Q92908 595 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 PSMG2Q969U7 264 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 ZFYVE19Q96K21 471 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 TBC1D32Q96NH3 1257 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 MRPL4Q9BYD3 311 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 DUSP15Q9H1R2 295 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 DNAJC25Q9H1X3 360 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 CDT1Q9H211 546 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 SMOC1Q9H4F8 434 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 TASP1Q9H6P5 420 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 LATS2Q9NRM7 1088 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 URB1O60287 2271 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 EML5Q05BV3 1969 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 CELSR3Q9NYQ7 3312 aa9.13□□□□□ -0.95
NIF3L1-208ENST00000436412 SRRM3A6NNA2 597 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 DRD1P21728 446 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 PROZP22891 400 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 CDC25CP30307 473 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 OSTNP61366 133 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 CREB5Q02930 508 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 TNK2Q07912 1038 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 SCRN1Q12765 414 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 DUSP4Q13115 394 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 MYBPC2Q14324 1141 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 STXBP5Q5T5C0 1151 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 GPR158Q5T848 1215 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 CENPPQ6IPU0 288 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 DNAJB7Q7Z6W7 309 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 USP37Q86T82 979 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 TTC8Q8TAM2 541 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 FAM83CQ9BQN1 747 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 TCHPQ9BT92 498 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 TMEM9BQ9NQ34 198 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 GJB4Q9NTQ9 266 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 ORC3Q9UBD5 711 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 GOLGA4Q13439 2230 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 THADAQ6YHU6 1953 aa9.12□□□□□ -0.95
NIF3L1-208ENST00000436412 KIF26AQ9ULI4 1882 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 LNP1A1A4G5 178 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 GIPC1O14908 333 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 PFKFB2O60825 505 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 VNN2O95498 520 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 APBB3O95704 486 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 ABL1P00519 1130 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 TYMPP19971 482 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 CYP3A5P20815 502 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 PAX3P23760 479 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 GABRR2P28476 465 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 HOXC13P31276 330 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 TUFMP49411 452 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 AARSP49588 968 aaKnown RBP eCLIP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 NLRP12P59046 1061 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 EHHADHQ08426 723 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 RUNX3Q13761 415 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 TCEAL6Q6IPX3 200 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 FSTL4Q6MZW2 842 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 PKN3Q6P5Z2 889 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 MPZL3Q6UWV2 235 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 SYT13Q7L8C5 426 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 ZCCHC14Q8WYQ9 949 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 TCEAL3Q969E4 200 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 UTP4Q969X6 686 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 C18orf25Q96B23 403 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 MYRFLQ96LU7 910 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 GCNAQ96QF7 691 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 BHLHE41Q9C0J9 482 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 C17orf75Q9HAS0 396 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 PLEKHA5Q9HAU0 1116 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 GKN1Q9NS71 199 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 PDRG1Q9NUG6 133 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 ARHGAP28Q9P2N2 729 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 STOML1Q9UBI4 398 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 NEUROG3Q9Y4Z2 214 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 ZNF638Q14966 1978 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 CFAP46Q8IYW2 2715 aa9.11□□□□□ -0.95
NIF3L1-208ENST00000436412 CCDC169A6NNP5 214 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 ABLIM1O14639 778 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 EDN3P14138 238 aa9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 DDX6P26196 483 aaKnown RBP eCLIP9.1□□□□□ -0.95
NIF3L1-208ENST00000436412 LRPAP1P30533 357 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms