RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 PAK1Q13153 545 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 DGKKQ5KSL6 1271 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 HECTD3Q5T447 861 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 ZC3H14Q6PJT7 736 aaKnown RBP19.36■□□□□ 0.69
HMGN1-207ENST00000436324 SLC4A11Q8NBS3 891 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 OVCA2Q8WZ82 227 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 ATP2A3Q93084 1043 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 CHFRQ96EP1 664 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 TMEM176AQ96HP8 235 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 CCSER2Q9H7U1 834 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 COMMD8Q9NX08 183 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 CFAP97Q9P2B7 532 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 COQ4Q9Y3A0 265 aa19.36■□□□□ 0.69
HMGN1-207ENST00000436324 HHLA1C9JL84 531 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 OLFM2O95897 454 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 TCF3P15923 654 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 ACO1P21399 889 aaKnown RBP19.35■□□□□ 0.69
HMGN1-207ENST00000436324 GJA4P35212 333 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 GALK1P51570 392 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 RAD23BP54727 409 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 GRSF1Q12849 480 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGN1-207ENST00000436324 ZNF528Q3MIS6 628 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 FSTL4Q6MZW2 842 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 SRRTQ9BXP5 876 aaKnown RBP19.35■□□□□ 0.69
HMGN1-207ENST00000436324 FBXO44Q9H4M3 255 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 FBRSL1Q9HCM7 1045 aaKnown RBP19.35■□□□□ 0.69
HMGN1-207ENST00000436324 PRMT8Q9NR22 394 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-207ENST00000436324 KIAA1468Q9P260 1216 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 PIEZO1Q92508 2521 aa19.35■□□□□ 0.69
HMGN1-207ENST00000436324 EGFP01133 1207 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 CXCL12P48061 93 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 CCR3P51677 355 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 AMPD2Q01433 879 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 NR1H3Q13133 447 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 CUL2Q13617 745 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 CCINQ13939 588 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 TMEM196Q5HYL7 178 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 TTC39CQ8N584 583 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 ATRIPQ8WXE1 791 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 FAXDC2Q96IV6 333 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 IER2Q9BTL4 223 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 DUSP16Q9BY84 665 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 NACA2Q9H009 215 aa19.34■□□□□ 0.69
HMGN1-207ENST00000436324 TLR8Q9NR97 1041 aaKnown RBP19.34■□□□□ 0.69
HMGN1-207ENST00000436324 KIF26AQ9ULI4 1882 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-207ENST00000436324 FAM92AA1XBS5 289 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 TRDMT1O14717 391 aaKnown RBP19.33■□□□□ 0.68
HMGN1-207ENST00000436324 CYP26A1O43174 497 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 NFATC1O95644 943 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 LMNAP02545 664 aaKnown RBP19.33■□□□□ 0.68
HMGN1-207ENST00000436324 ZDHHC11BP0C7U3 371 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 IRF1P10914 325 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 SNX30Q5VWJ9 437 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 SPEM1Q8N4L4 309 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 P2RY13Q9BPV8 354 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 C2orf42Q9NWW7 574 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 ZSCAN32Q9NX65 697 aa19.33■□□□□ 0.68
HMGN1-207ENST00000436324 PATJQ8NI35 1801 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 TBX18O95935 607 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 PPP2R5DQ14738 602 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 PKN3Q6P5Z2 889 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 DDX42Q86XP3 938 aaKnown RBP eCLIP19.32■□□□□ 0.684e-6■□□□□ 10.9
HMGN1-207ENST00000436324 CREBRFQ8IUR6 639 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 TRIML1Q8N9V2 468 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 CD101Q93033 1021 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 SEMA4AQ9H3S1 761 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 SCML2Q9UQR0 700 aa19.32■□□□□ 0.68
HMGN1-207ENST00000436324 A0A1W2PQH9 124 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 TLR5O60602 858 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 CD19P15391 556 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 HOXC13P31276 330 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 KIF11P52732 1056 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
HMGN1-207ENST00000436324 FOXR2Q6PJQ5 311 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 MAMSTRQ6ZN01 415 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 ADGRG2Q8IZP9 1017 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 SYNPOQ8N3V7 929 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 WBP2Q969T9 261 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 ZFRQ96KR1 1074 aaKnown RBP19.31■□□□□ 0.68
HMGN1-207ENST00000436324 NT5C1BQ96P26 610 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 OSER1Q9NX31 292 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 NUDT5Q9UKK9 219 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 SH3BP1Q9Y3L3 701 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 PCDHGA2Q9Y5H1 932 aa19.31■□□□□ 0.68
HMGN1-207ENST00000436324 ZFHX2Q9C0A1 2572 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-207ENST00000436324 SLC9A3R1O14745 358 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-207ENST00000436324 MDM4O15151 490 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 RNF40O75150 1001 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 GNA14O95837 355 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 CYP17A1P05093 508 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 TDGF1P13385 188 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 TBXAS1P24557 533 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-207ENST00000436324 TUBP50607 506 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 DMWDQ09019 674 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 CETN1Q12798 172 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 KCNH2Q12809 1159 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 DHCR24Q15392 516 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 GOLGA7BQ2TAP0 167 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 ARHGAP17Q68EM7 881 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 HEATR6Q6AI08 1181 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms