RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TRABDQ9H4I3 376 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 MROH8Q9H579 483 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 IKBKGQ9Y6K9 419 aa16.26■□□□□ 0.19
SCARF1-203ENST00000434376 ABCG1P45844 678 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 GTF2A2P52657 109 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 OLIG2Q13516 323 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 HHATQ5VTY9 493 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 TTC17Q96AE7 1141 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 SLC17A6Q9P2U8 582 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 PMM2O15305 246 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 TMEM63AO94886 807 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 PIGRP01833 764 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 RBL1P28749 1068 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 GMPRP36959 345 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 BCAR1P56945 870 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 HUNKP57058 714 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 CLDN10P78369 228 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 SATB1Q01826 763 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 KDELC2Q7Z4H8 507 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 FBF1Q8TES7 1133 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
SCARF1-203ENST00000434376 USP15Q9Y4E8 981 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-203ENST00000434376 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 CCDC189A1A4V9 331 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 C2orf71A6NGG8 1288 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 PGK1P00558 417 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 SDC4P31431 198 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 RPA3P35244 121 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-203ENST00000434376 GRIA1P42261 906 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 DRG2P55039 364 aaKnown RBP16.25■□□□□ 0.19
SCARF1-203ENST00000434376 NCALDP61601 193 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 RBP5P82980 135 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 CLUL1Q15846 466 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 EML3Q32P44 896 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 VSTM1Q6UX27 236 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
SCARF1-203ENST00000434376 EME2A4GXA9 379 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 DNALI1O14645 258 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 KITP10721 976 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 MMP13P45452 471 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 NDUFV1P49821 464 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 CENPUQ71F23 418 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 TRMT10CQ7L0Y3 403 aaKnown RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 CCDC125Q86Z20 511 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 UPF1Q92900 1129 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 MARCOQ9UEW3 520 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 RBBP6Q7Z6E9 1792 aaKnown RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 USP12O75317 370 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 CILPO75339 1184 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 TOP3BO95985 862 aaKnown RBP16.24■□□□□ 0.19
SCARF1-203ENST00000434376 ZBED1O96006 694 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 P4HA1P13674 534 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 DCAF6Q58WW2 860 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 TTC30AQ86WT1 665 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 TMEM237Q96Q45 408 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 GHRP10912 638 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 SAT1P21673 171 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 ELK3P41970 407 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 GPD2P43304 727 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 SPARCL1Q14515 664 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 IGDCC3Q8IVU1 814 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 UNC5BQ8IZJ1 945 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 ZNF570Q96NI8 536 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 TINF2Q9BSI4 451 aa16.24■□□□□ 0.19
SCARF1-203ENST00000434376 ZNF646O15015 1829 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 B4GALT4O60513 344 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 GPD1P21695 349 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 ZNF132P52740 706 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 SESN2P58004 480 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 GBE1Q04446 702 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 PGM2Q96G03 612 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 PTPN18Q99952 460 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 APOL2Q9BQE5 337 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 PTPRHQ9HD43 1115 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 ACSS2Q9NR19 701 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 SIGLEC16A6NMB1 481 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 SNX3O60493 162 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 PAEPP09466 180 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 AMPD1P23109 780 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 MOGSQ13724 837 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 CDCA2Q69YH5 1023 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 RFX8Q6ZV50 586 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 ALLCQ8N6M5 410 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 ARMC2Q8NEN0 867 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 RHOBTB2Q9BYZ6 727 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 STMN4Q9H169 189 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-203ENST00000434376 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms