RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TMEM30AQ9NV96 361 aa15.82■□□□□ 0.12
PRKDC-203ENST00000432581 BCCIPQ9P287 314 aaKnown RBP eCLIP15.82■□□□□ 0.12
PRKDC-203ENST00000432581 CGNQ9P2M7 1197 aaKnown RBP15.82■□□□□ 0.12
PRKDC-203ENST00000432581 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
PRKDC-203ENST00000432581 ANAPC1Q9H1A4 1944 aa15.82■□□□□ 0.12
PRKDC-203ENST00000432581 ANTXRLA6NF34 631 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 PATE3B3GLJ2 98 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 CLDN5O00501 218 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 CDX4O14627 284 aaPredicted RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 SPTLC2O15270 562 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 PPP6R2O75170 966 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 CHRM1P11229 460 aaPredicted RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 HNRNPLP14866 589 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 TUBP50607 506 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 IRX4P78413 519 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 GAD2Q05329 585 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 MESP2Q0VG99 397 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 IFRD2Q12894 506 aaPredicted RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 LY6G5CQ5SRR4 150 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 HECTD3Q5T447 861 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 BTBD8Q5XKL5 378 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 TRMT11Q7Z4G4 463 aaKnown RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 C12orf40Q86WS4 652 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 KCNV2Q8TDN2 545 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 DHX58Q96C10 678 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 DUSP9Q99956 384 aaKnown RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 C7orf25Q9BPX7 421 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 NUSAP1Q9BXS6 441 aaKnown RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 XYLT2Q9H1B5 865 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
PRKDC-203ENST00000432581 NXF1Q9UBU9 619 aaKnown RBP15.81■□□□□ 0.12
PRKDC-203ENST00000432581 CFAP47Q6ZTR5 3102 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SCAMP3O14828 347 aaKnown RBP15.8■□□□□ 0.12
PRKDC-203ENST00000432581 CLIC2O15247 247 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 HOXC11O43248 304 aaPredicted RBP15.8■□□□□ 0.12
PRKDC-203ENST00000432581 COCHO43405 550 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 STX6O43752 255 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 PHACTR2O75167 634 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 MYL6P60660 151 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 KDSRQ06136 332 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 TRIM61Q5EBN2 209 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SNX30Q5VWJ9 437 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 NUDT18Q6ZVK8 323 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SYT12Q8IV01 421 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SFTPA1Q8IWL2 248 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 NELFCDQ8IXH7 590 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 C12orf56Q8IXR9 622 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SCFD1Q8WVM8 642 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 RLN3Q8WXF3 142 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 ZFRQ96KR1 1074 aaKnown RBP15.8■□□□□ 0.12
PRKDC-203ENST00000432581 ZNF396Q96N95 335 aaPredicted RBP15.8■□□□□ 0.12
PRKDC-203ENST00000432581 VRTNQ9H8Y1 702 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 DMAP1Q9NPF5 467 aaPredicted RBP15.8■□□□□ 0.12
PRKDC-203ENST00000432581 COMMD8Q9NX08 183 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 SH3BP1Q9Y3L3 701 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 ABCA7Q8IZY2 2146 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 KIAA1549LQ6ZVL6 1849 aa15.8■□□□□ 0.12
PRKDC-203ENST00000432581 HELZP42694 1942 aaKnown RBP15.79■□□□□ 0.12
PRKDC-203ENST00000432581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 TCRBV21S2A2A0A5A6 115 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 TBC1D3BA6NDS4 549 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 ADAM23O75077 832 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 HOXD12P35452 270 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 AP3M2P53677 418 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 SLC5A3P53794 718 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 EHHADHQ08426 723 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 FOXC1Q12948 553 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 BMT2Q1RMZ1 405 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 MAP7D1Q3KQU3 841 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 UAP1L1Q3KQV9 507 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 EMC10Q5UCC4 262 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 LYSMD4Q5XG99 296 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 UNQ6494/PRO21346Q6UXR6 183 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 FAM35AQ86V20 835 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 ETFBKMTQ8IXQ9 262 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 TMEFF1Q8IYR6 380 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 PHTF2Q8N3S3 785 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 ZNF516Q92618 1163 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 SMARCD1Q96GM5 515 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 MED10Q9BTT4 135 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
PRKDC-203ENST00000432581 IL37Q9NZH6 218 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 DEC1Q9P2X7 70 aa15.79■□□□□ 0.12
PRKDC-203ENST00000432581 CHORDC1Q9UHD1 332 aaPredicted RBP15.79■□□□□ 0.12
PRKDC-203ENST00000432581 MYO16Q9Y6X6 1858 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 EXOC3O60645 756 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 CUTAO60888 179 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 YEATS4O95619 227 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
PRKDC-203ENST00000432581 BIRC3Q13489 604 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 ZNF699Q32M78 642 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 ZNF667Q5HYK9 610 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 ARMCX6Q7L4S7 300 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 PGBD3Q8N328 593 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 ZNF513Q8N8E2 541 aaPredicted RBP15.78■□□□□ 0.12
PRKDC-203ENST00000432581 SCAMP5Q8TAC9 235 aa15.78■□□□□ 0.12
PRKDC-203ENST00000432581 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms