RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CSH2P0DML3 217 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CALB2P22676 271 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 ARRB2P32121 409 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NAMPTP43490 491 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RGS7P49802 495 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CLCN3P51790 818 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RTP1P59025 263 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PSMC1P62191 440 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 IRX4P78413 519 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CRADDP78560 199 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 LACTBP83111 547 aaPredicted RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 MKRN3Q13064 507 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 OLIG2Q13516 323 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 BLMHQ13867 455 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 C4orf50Q6ZRC1 276 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CENPUQ71F23 418 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RFX6Q8HWS3 928 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 GBP7Q8N8V2 638 aaPredicted RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RNF149Q8NC42 400 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TRIM11Q96F44 468 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 RBM41Q96IZ5 413 aaKnown RBP7.5□□□□□ -1.21
COL28A1-202ENST00000430711 FAM81BQ96LP2 452 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF778Q96MU6 729 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 EBF4Q9BQW3 602 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 NIF3L1Q9GZT8 377 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TMPRSS4Q9NRS4 437 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TAS2R1Q9NYW7 299 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 BTBD7Q9P203 1132 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 CNTN3Q9P232 1028 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 GJD2Q9UKL4 321 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 SHOC2Q9UQ13 582 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 TTLL3Q9Y4R7 772 aa7.5□□□□□ -1.21
COL28A1-202ENST00000430711 PTPRFP10586 1907 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 A6NHS1 94 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 E7ESA3 106 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 GPR25O00155 361 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 NFKBIEO00221 500 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 C2CD2LO14523 706 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PPEF2O14830 753 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ADCY6O43306 1168 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ADCY3O60266 1144 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 LYPLA1O75608 230 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PGK2P07205 417 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 DHRS4L1P0CG22 281 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 RBP3P10745 1247 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 MYL2P10916 166 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 KRT3P12035 628 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 IL4RP24394 825 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PHKA2P46019 1235 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 INHBEP58166 350 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 EIF3EP60228 445 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 YWHAZP63104 245 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ATP11AP98196 1134 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PTK7Q13308 1070 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PRKD1Q15139 912 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 RCN1Q15293 331 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PARP6Q2NL67 630 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 RNF220Q5VTB9 566 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 FKBP1CQ5VVH2 108 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ISLR2Q6UXK2 745 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF534Q76KX8 674 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 RPAINQ86UA6 219 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 MICALL2Q8IY33 904 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 NIM1KQ8IY84 436 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 C1orf127Q8N9H9 656 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 SLC4A11Q8NBS3 891 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 MTMR14Q8NCE2 650 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 CXorf38Q8TB03 319 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 SPATA18Q8TC71 538 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 CLEC4CQ8WTT0 213 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 MAIP1Q8WWC4 291 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 USP6NLQ92738 828 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 RSRC1Q96IZ7 334 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 VCPIP1Q96JH7 1222 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ACO2Q99798 780 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 DDX50Q9BQ39 737 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 B3GNT5Q9BYG0 378 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 C17orf75Q9HAS0 396 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 TXLNGQ9NUQ3 528 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 CPSF3Q9UKF6 684 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 DRG1Q9Y295 367 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 PDE4DIPQ5VU43 2346 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 GSC2O15499 205 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 MICAL2O94851 1124 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 TIE1P35590 1138 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 TCF7P36402 384 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 SKIV2L2P42285 1042 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 GMPSP49915 693 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 CCNG1P51959 295 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 BPIFB4P59827 614 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 YWHAGP61981 247 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 LAMTOR4Q0VGL1 99 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
COL28A1-202ENST00000430711 DPYSL3Q14195 570 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 KCNJ11Q14654 390 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 TAZQ16635 292 aa7.49□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms