RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 SNX13Q9Y5W8 968 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 PTPN4P29074 926 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 QRICH1Q2TAL8 776 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 DCAF6Q58WW2 860 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 MZT2AQ6P582 158 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 KLHL17Q6TDP4 642 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF483Q8TF39 744 aaPredicted RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ING3Q9NXR8 418 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 RBP3P10745 1247 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 MZF1P28698 734 aaPredicted RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 GTF3C4Q9UKN8 822 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 DSEQ9UL01 958 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 KCNQ3O43525 872 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 YWHAQP27348 245 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 CCNG1P51959 295 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 NAB1Q13506 487 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ZBTB49Q6ZSB9 765 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 TBC1D10CQ8IV04 446 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 AADATQ8N5Z0 425 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 NLNQ9BYT8 704 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 PXDNLA1KZ92 1463 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 TRIM49D1C9J1S8 452 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 CCNA2P20248 432 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 HNRNPH1P31943 449 aaKnown RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 SCTRP47872 440 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 WDR48Q8TAF3 677 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 CPA5Q8WXQ8 436 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 LRRC40Q9H9A6 602 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 GALNT8Q9NY28 637 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 H7C4K7 107 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 GRK4P32298 578 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PREPLQ4J6C6 727 aaPredicted RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ZCCHC7Q8N3Z6 543 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 FLT3P36888 993 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SKIV2LQ15477 1246 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 TMEM26Q6ZUK4 368 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 MS4A14Q96JA4 679 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 MLPHQ9BV36 600 aaPredicted RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 CLPBQ9H078 707 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 NRKQ7Z2Y5 1582 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 RRN3P2A6NIE6 340 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 RNASEH1O60930 286 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 TPBGLP0DKB5 382 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PIK3CGP48736 1102 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SLC29A2Q14542 456 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ATG16L2Q8NAA4 619 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 TEX33O43247 280 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 FBXO21O94952 628 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 HSD17B3P37058 310 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 MIEF1Q9NQG6 463 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PDGFCQ9NRA1 345 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 LSM8O95777 96 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 S100GP29377 79 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 AP1S2P56377 157 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ATAD3BQ5T9A4 648 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SH2D3CQ8N5H7 860 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 MDM1Q8TC05 714 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ZIM3Q96PE6 472 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 TMEM79Q9BSE2 394 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 NPHP4O75161 1426 aaPredicted RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 TRPM1Q7Z4N2 1603 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 HOXB8P17481 243 aaPredicted RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ATP6V1B2P21281 511 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 BNC1Q01954 994 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 NFIL3Q16649 462 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 PPP1R10Q96QC0 940 aaKnown RBP14.89□□□□□ -0.03
PTPN13-203ENST00000427191 ERGIC2Q96RQ1 377 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 EPB41L4BQ9H329 900 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 SLC25A13Q9UJS0 675 aa14.89□□□□□ -0.03
PTPN13-203ENST00000427191 H7C1W4 665 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 MCL1Q07820 350 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 CDH18Q13634 790 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 C9orf72Q96LT7 481 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 ZMYM2Q9UBW7 1377 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 LARGE1O95461 756 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 TOP3AQ13472 1001 aaPredicted RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 PCSK7Q16549 785 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 GLB1LQ6UWU2 654 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 RACGAP1Q9H0H5 632 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 RPS6KL1Q9Y6S9 549 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 NR3C2P08235 984 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 GSTM1P09488 218 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 GHRP10912 638 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 COMTP21964 271 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms