RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CRACR2AQ9BSW2 395 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 KCNH6Q9H252 994 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 OSER1Q9NX31 292 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 IL37Q9NZH6 218 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 ARHGAP26Q9UNA1 814 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 CPQQ9Y646 472 aa14.4□□□□□ -0.1
SNX3-204ENST00000426155 ATG2BQ96BY7 2078 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 FAM92AA1XBS5 289 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 SPECC1L-ADORA2AF8WAN1 911 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 GOLGA6L22H0YM25 854 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 LEFTY2O00292 366 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 TULP2O00295 520 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 P4HA2O15460 535 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 COCHO43405 550 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 FGFR1OPO95684 399 aaKnown RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 MBL2P11226 248 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 TBXAS1P24557 533 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 CTHP32929 405 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 PTPN5P54829 565 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 FZD5Q13467 585 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 TPD52L1Q16890 204 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 NAIF1Q69YI7 327 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 EHBP1Q8NDI1 1231 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 PDZD8Q8NEN9 1154 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 FAM122AQ96E09 287 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 KREMEN1Q96MU8 473 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 NMUR1Q9HB89 426 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 THG1LQ9NWX6 298 aaKnown RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 TSPAN16Q9UKR8 245 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
SNX3-204ENST00000426155 PCDHB4Q9Y5E5 795 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 VPS13AQ96RL7 3174 aa14.39□□□□□ -0.11
SNX3-204ENST00000426155 ZDHHC11BP0C7U3 371 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 SLC9A1P19634 815 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 PPP3CCP48454 512 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 NUBP1P53384 320 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 YWHAEP62258 255 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 SLC7A9P82251 487 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 CETN1Q12798 172 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 RUNX3Q13761 415 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 PON2Q15165 354 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 ANGPT1Q15389 498 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 C11orf57Q6ZUT1 292 aaPredicted RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 RBBP8NLQ8NC74 664 aaPredicted RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 OSCP1Q8WVF1 389 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 OVCA2Q8WZ82 227 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 TFAP2BQ92481 460 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 WBP2Q969T9 261 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 ZFRQ96KR1 1074 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 LINC00597Q9H2U6 94 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
SNX3-204ENST00000426155 NUDT5Q9UKK9 219 aa14.38□□□□□ -0.11
SNX3-204ENST00000426155 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 O00370 1275 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 MAN2B1O00754 1011 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 MDM4O15151 490 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 TBX18O95935 607 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 BRD2P25440 801 aaKnown RBP14.37□□□□□ -0.11
SNX3-204ENST00000426155 ERCC5P28715 1186 aaPredicted RBP14.37□□□□□ -0.11
SNX3-204ENST00000426155 IFNAR2P48551 515 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 KIF11P52732 1056 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 GCNT1Q02742 428 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 PDE4CQ08493 712 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 EML3Q32P44 896 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 SGO2Q562F6 1265 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 HECTD3Q5T447 861 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 SNX30Q5VWJ9 437 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 CC2D1AQ6P1N0 951 aaPredicted RBP14.37□□□□□ -0.11
SNX3-204ENST00000426155 TRIM65Q6PJ69 517 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 PIGZQ86VD9 579 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 PRRX2Q99811 253 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 OSBPL6Q9BZF3 934 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 DNAI2Q9GZS0 605 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 FBXO44Q9H4M3 255 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 THAP9Q9H5L6 903 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 FAM124BQ9H5Z6 455 aaPredicted RBP14.37□□□□□ -0.11
SNX3-204ENST00000426155 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 DUS2Q9NX74 493 aaKnown RBP14.37□□□□□ -0.11
SNX3-204ENST00000426155 CFAP97Q9P2B7 532 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 DACH1Q9UI36 760 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 SCML2Q9UQR0 700 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
SNX3-204ENST00000426155 TLR5O60602 858 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 IRF1P10914 325 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 VDRP11473 427 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 TCF3P15923 654 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms