RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MAN1C1Q9NR34 630 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 TNFRSF10BO14763 440 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
PRPF39-202ENST00000424478 GLUD1P00367 558 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 C8AP07357 584 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 IGFBP4P22692 258 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 PLD1Q13393 1074 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 CDO1Q16878 200 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 HS1BP3Q53T59 392 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 DNAJC24Q6P3W2 148 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 OLFML1Q6UWY5 402 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 SPPL2BQ8TCT7 592 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 NOX5Q96PH1 765 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 EMILIN2Q9BXX0 1053 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 TLE6Q9H808 572 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 INSL5Q9Y5Q6 135 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 FANCGO15287 622 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 TMEM253P0C7T8 217 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 TCF4P15884 667 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 ANXA13P27216 316 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
PRPF39-202ENST00000424478 ADGRE1Q14246 886 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 MESDQ14696 234 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 TMEM110Q86TL2 294 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.155e-10■■■□□ 16.6
PRPF39-202ENST00000424478 DNAI2Q9GZS0 605 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 OSER1Q9NX31 292 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 FNIP2Q9P278 1114 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 ANAPC7Q9UJX3 599 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 USTQ9Y2C2 406 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 GREB1Q4ZG55 1949 aa14.13□□□□□ -0.15
PRPF39-202ENST00000424478 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 C15orf59Q2T9L4 293 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 LILRA6Q6PI73 481 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF564Q8TBZ8 553 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 CFAP57Q96MR6 1250 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 NGRNQ9NPE2 291 aaKnown RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 GMIPQ9P107 970 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 MDM4O15151 490 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 NCK2O43639 380 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 FTCDO95954 541 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 MSNP26038 577 aaKnown RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 NTHL1P78549 312 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ATP11AP98196 1134 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 DENND5BQ6ZUT9 1274 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 BHLHA9Q7RTU4 235 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 FUBP3Q96I24 572 aaKnown RBP eCLIP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 PSMB7Q99436 277 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 SELENOOQ9BVL4 669 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 NAALADL1Q9UQQ1 740 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ATP8B3O60423 1300 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 TCRBV5S1A1TA0A578 114 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 SLC38A8A6NNN8 435 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ENC1O14682 589 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 TBX18O95935 607 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 UBE3AQ05086 875 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF252P-AS1Q0IIN9 211 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 TAF10Q12962 218 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 LLGL1Q15334 1064 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 DCUN1D2Q6PH85 259 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ACSF2Q96CM8 615 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 SAMD11Q96NU1 681 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF334Q9HCZ1 680 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-202ENST00000424478 CALCOCO1Q9P1Z2 691 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 IRAK3Q9Y616 596 aa14.12□□□□□ -0.15
PRPF39-202ENST00000424478 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
PRPF39-202ENST00000424478 BUB1BO60566 1050 aaPredicted RBP14.11□□□□□ -0.15
PRPF39-202ENST00000424478 ZBED1O96006 694 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 KRT3P12035 628 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 GJC1P36383 396 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 TMC5Q6UXY8 1006 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 NUP93Q8N1F7 819 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 WDR24Q96S15 920 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 A0A1W2PQH9 124 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 ESPNB1AK53 854 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 ZSCAN12O43309 604 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 PALMO75781 387 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 CYP1A2P05177 515 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 CALB1P05937 261 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 DAOAP59103 153 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 LRIT3Q3SXY7 679 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 RAB41Q5JT25 222 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF569Q5MCW4 686 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 LIN9Q5TKA1 542 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 RFFLQ8WZ73 363 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 FBXW11Q9UKB1 542 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 PATJQ8NI35 1801 aa14.11□□□□□ -0.15
PRPF39-202ENST00000424478 FYNP06241 537 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 GABRB2P47870 512 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 MRPS5P82675 430 aaKnown RBP14.1□□□□□ -0.15
PRPF39-202ENST00000424478 SLC6A3Q01959 620 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 TPGS2Q68CL5 300 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms