RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 C12orf50Q8NA57 414 aaPredicted RBP19.61■□□□□ 0.73
SREBF1-206ENST00000423161 SCAMP5Q8TAC9 235 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 TMC2Q8TDI7 906 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 USP33Q8TEY7 942 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 ZC3H10Q96K80 434 aaKnown RBP19.61■□□□□ 0.73
SREBF1-206ENST00000423161 KRT82Q9NSB4 513 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 EBF1Q9UH73 591 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 HPSEQ9Y251 543 aa19.61■□□□□ 0.73
SREBF1-206ENST00000423161 K7EQS6 105 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 TNFRSF10BO14763 440 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 COCHO43405 550 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 AP1G2O75843 785 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 RPN1P04843 607 aaKnown RBP19.6■□□□□ 0.73
SREBF1-206ENST00000423161 DGKEP52429 567 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 KRT85P78386 507 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 SGSM1Q2NKQ1 1148 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 PLK5Q496M5 336 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 C2orf27AQ580R0 203 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 FUKQ8N0W3 1084 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 TSTD1Q8NFU3 115 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 CHORDC1Q9UHD1 332 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-206ENST00000423161 FRMD4BQ9Y2L6 1034 aa19.6■□□□□ 0.73
SREBF1-206ENST00000423161 TPRP12270 2363 aaKnown RBP19.59■□□□□ 0.73
SREBF1-206ENST00000423161 CALUO43852 315 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-206ENST00000423161 ADH1CP00326 375 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 ZNF806P0C7X5 589 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 CCDC130P13994 396 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 PIK3CAP42336 1068 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 SYKP43405 635 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 NDST1P52848 882 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 ORC1Q13415 861 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 HECTD3Q5T447 861 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 SV2AQ7L0J3 742 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 TAF4BQ92750 862 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 ZFRQ96KR1 1074 aaKnown RBP19.59■□□□□ 0.73
SREBF1-206ENST00000423161 DUSP15Q9H1R2 295 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-206ENST00000423161 CCSER2Q9H7U1 834 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 IL37Q9NZH6 218 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 GMIPQ9P107 970 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 TBC1D14Q9P2M4 693 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 HMGXB4Q9UGU5 601 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 MMP17Q9ULZ9 603 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 PCDHGA5Q9Y5G8 931 aa19.59■□□□□ 0.73
SREBF1-206ENST00000423161 E2F8A0AVK6 867 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 ANTXRLA6NF34 631 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 IKBKBO14920 756 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 DCLK1O15075 740 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 KIF20AO95235 890 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 ASS1P00966 412 aaKnown RBP19.58■□□□□ 0.72
SREBF1-206ENST00000423161 HLA-DRAP01903 254 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 PRR29P0C7W0 189 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 ADH5P11766 374 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 MPLP40238 635 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 EIF2DP41214 584 aaKnown RBP19.58■□□□□ 0.72
SREBF1-206ENST00000423161 SLC6A11P48066 632 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 ELF2Q15723 593 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 PPM1JQ5JR12 505 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 SNX30Q5VWJ9 437 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 SPOPLQ6IQ16 392 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 RHBDF2Q6PJF5 856 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 C12orf40Q86WS4 652 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 CCDC33Q8N5R6 958 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 ZMIZ2Q8NF64 920 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 SLC2A14Q8TDB8 520 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 CCDC47Q96A33 483 aaKnown RBP19.58■□□□□ 0.72
SREBF1-206ENST00000423161 PNKPQ96T60 521 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 SMOQ99835 787 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 FAM49BQ9NUQ9 324 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 COMMD8Q9NX08 183 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 TRAF3IP3Q9Y228 551 aa19.58■□□□□ 0.72
SREBF1-206ENST00000423161 PLXND1Q9Y4D7 1925 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 FAM92AA1XBS5 289 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 BEST1O76090 585 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 APODP05090 189 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 ASPAP45381 313 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 TUBP50607 506 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 VAMP7P51809 220 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 NDUFA8P51970 172 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 MRPS21P82921 87 aaKnown RBP19.57■□□□□ 0.72
SREBF1-206ENST00000423161 MESP2Q0VG99 397 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 PLA2G2CQ5R387 149 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 UNC93AQ86WB7 457 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 SFTPA1Q8IWL2 248 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 CRYBG2Q8N1P7 616 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 OTUB2Q96DC9 234 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 TPSD1Q9BZJ3 242 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 SMOC1Q9H4F8 434 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.57■□□□□ 0.725e-7■■■■■ 97.7
SREBF1-206ENST00000423161 ZDHHC9Q9Y397 364 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 SH3BP1Q9Y3L3 701 aa19.57■□□□□ 0.72
SREBF1-206ENST00000423161 MAPK13O15264 365 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 RHOBTB1O94844 696 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 KAT7O95251 611 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 ZDHHC11BP0C7U3 371 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
SREBF1-206ENST00000423161 NR2F2P24468 414 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 GBP1P32455 592 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms