RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 F8W810 466 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 ZNF682O95780 498 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 POU1F1P28069 291 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 SLC20A2Q08357 652 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 SPASTQ9UBP0 616 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 CLOCKO15516 846 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 IL18RAPO95256 599 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 DGKDQ16760 1214 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
CLCN4-203ENST00000421085 ZNF483Q8TF39 744 aaPredicted RBP12.75□□□□□ -0.37
CLCN4-203ENST00000421085 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 SPATA2Q9UM82 520 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 COL15A1P39059 1388 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 FAM20BO75063 409 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 CAPN1P07384 714 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
CLCN4-203ENST00000421085 SLC20A1Q8WUM9 679 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
CLCN4-203ENST00000421085 RNPEPL1Q9HAU8 725 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 WWOXQ9NZC7 414 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 CLCA2Q9UQC9 943 aa12.75□□□□□ -0.37
CLCN4-203ENST00000421085 IGSF9BQ9UPX0 1349 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 C21orf2O43822 256 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ANXA9O76027 345 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 PRKCEQ02156 737 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RIPOR1Q6ZS17 1223 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RTKN2Q8IZC4 609 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ATG16L2Q8NAA4 619 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 OSBPL10Q9BXB5 764 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TBX20Q9UMR3 447 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RPS6KA4O75676 772 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ASMTLO95671 621 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 MLNP12872 115 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 IL12RB1P42701 662 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TWF1Q12792 350 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 CDH24Q86UP0 819 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 PYDC1Q8WXC3 89 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 MMADHCQ9H3L0 296 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SAR1AQ9NR31 198 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 UBDO15205 165 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 NDUFB10O96000 172 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ALOX12P18054 663 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 BAG6P46379 1132 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ALDH6A1Q02252 535 aaKnown RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 NCF4Q15080 339 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 YTHDF3Q7Z739 585 aaKnown RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SLC47A2Q86VL8 602 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TMEM191CA6NGB0 347 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RRM1P23921 792 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RRM2P31350 389 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 RAD23AP54725 363 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 EXD1Q8NHP7 514 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SPRTNQ9H040 489 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ZSCAN32Q9NX65 697 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 NCAM1P13591 858 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 CCT8P50990 548 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 CSE1LP55060 971 aaKnown RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 CDK16Q00536 496 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ITGADQ13349 1161 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 DHFR2Q86XF0 187 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 DDX50Q9BQ39 737 aaKnown RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 SEMA6AQ9H2E6 1030 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
CLCN4-203ENST00000421085 TRMT6Q9UJA5 497 aaKnown RBP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLCN4-203ENST00000421085 OPLAHO14841 1288 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 AHCYL1O43865 530 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 BAIAP3O94812 1187 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 MED26O95402 600 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 GZMAP12544 262 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 RASA1P20936 1047 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 RGS2P41220 211 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 SLC9A5Q14940 896 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 N4BP2L1Q5TBK1 243 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-203ENST00000421085 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
CLCN4-203ENST00000421085 ZSCAN18Q8TBC5 510 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-203ENST00000421085 RAD21L1Q9H4I0 556 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-203ENST00000421085 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 NCKIPSDQ9NZQ3 722 aa12.73□□□□□ -0.37
CLCN4-203ENST00000421085 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-203ENST00000421085 XRCC4Q13426 336 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms