RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PLA1AQ53H76 456 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 PXDC1Q5TGL8 231 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 VPS53Q5VIR6 699 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 AWAT2Q6E213 333 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 RGS7BPQ6MZT1 257 aaPredicted RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC18B1Q6NT16 456 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF551Q7Z340 670 aaPredicted RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 TECPR1Q7Z6L1 1165 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 SPSB4Q96A44 273 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 TRIM43Q96BQ3 446 aaPredicted RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 MESP1Q9BRJ9 268 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 BTBD1Q9H0C5 482 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 MYH16Q9H6N6 1097 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 GLOD4Q9HC38 313 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 SERTAD3Q9UJW9 196 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 EIF4G1Q04637 1599 aaKnown RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 FHAD1B1AJZ9 1412 aa3.96□□□□□ -1.77
SDCBPP3-201ENST00000419629 WDR97A6NE52 1622 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 KIF21BO75037 1637 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 LOC102723971A0A1B0GUV8 181 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 A6NNZ2 444 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 QSOX1O00391 747 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 DYNC1I1O14576 645 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 CLGNO14967 610 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 FRAT2O75474 233 aaPredicted RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 RASSF9O75901 435 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 TOP3BO95985 862 aaKnown RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 PTMAP06454 111 aaKnown RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SNHG28P0DPA3 235 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SFPQP23246 707 aaKnown RBP eCLIP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 PCSK6P29122 969 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 BOP1Q14137 746 aaKnown RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 CEP78Q5JTW2 689 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 DNTTIP2Q5QJE6 756 aaKnown RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRAMEF17Q5VTA0 474 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 DCAF12L1Q5VU92 463 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SWSAP1Q6NVH7 229 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 WDR53Q7Z5U6 358 aaPredicted RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 YAF2Q8IY57 180 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SPARTQ8N0X7 666 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SDR16C5Q8N3Y7 309 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 OSCP1Q8WVF1 389 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 REPS1Q96D71 796 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 HMCESQ96FZ2 354 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SH2D3AQ9BRG2 576 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 TSPYL1Q9H0U9 437 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 ARHGEF3Q9NR81 526 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 ELOVL5Q9NYP7 299 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 CPNE7Q9UBL6 633 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 DKK3Q9UBP4 350 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 HDAC9Q9UKV0 1011 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 NDRG4Q9ULP0 352 aaKnown RBP3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 SNX13Q9Y5W8 968 aa3.96□□□□□ -1.78
SDCBPP3-201ENST00000419629 USP19O94966 1318 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CNTLNQ9NXG0 1405 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 NCOA2Q15596 1464 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 MYMKA6NI61 221 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 KCNU1A8MYU2 1149 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 PYCARD-AS1I3L0S3 204 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 PPEF2O14830 753 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 PPM1DO15297 605 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCP110O43303 1012 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CAND2O75155 1236 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 DLDP09622 509 aaKnown RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 FAM163BP0C2L3 166 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 JUPP14923 745 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRKAR1BP31321 381 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCKBRP32239 447 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 DGKEP52429 567 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 FMO1Q01740 532 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 MYO1EQ12965 1108 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 SEMA5AQ13591 1074 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZNF260Q3ZCT1 412 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCDC181Q5TID7 509 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 SLC2A7Q6PXP3 512 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 C11orf96Q7Z7L8 435 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 BPIFB1Q8TDL5 484 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ATG4AQ8WYN0 398 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 RAPGEF4Q8WZA2 1011 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZNF622Q969S3 477 aaKnown RBP eCLIP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 STRBPQ96SI9 672 aaKnown RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCDC94Q9BW85 323 aaPredicted RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ADGRE3Q9BY15 652 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 UNKQ9C0B0 810 aaKnown RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZCWPW1Q9H0M4 648 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 SMURF2Q9HAU4 748 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 PNPLA8Q9NP80 782 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 SERHLQ9NQF3 203 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 XPNPEP3Q9NQH7 507 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 TMEM51Q9NW97 253 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCNL1Q9UK58 526 aaPredicted RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZHX1Q9UKY1 873 aaPredicted RBP3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCDC144AA2RUR9 1427 aa3.95□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCNB3Q8WWL7 1395 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 H3BNC9 293 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PSMD9O00233 223 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZNF213O14771 459 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PQBP1O60828 265 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms