RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 INVSQ9Y283 1065 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 TPRP12270 2363 aaKnown RBP15.31■□□□□ 0.04
PAF1-202ENST00000416728 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 ATG2BQ96BY7 2078 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 E2F8A0AVK6 867 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 BCLAF3A2AJT9 711 aaKnown RBP15.31■□□□□ 0.04
PAF1-202ENST00000416728 ANTXRLA6NF34 631 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.31■□□□□ 0.04
PAF1-202ENST00000416728 TM4SF5O14894 197 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 COCHO43405 550 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 KAT7O95251 611 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 C4BPAP04003 597 aaKnown RBP15.31■□□□□ 0.04
PAF1-202ENST00000416728 APODP05090 189 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 ADH5P11766 374 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 P4HA1P13674 534 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 SLC6A11P48066 632 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 STK4Q13043 487 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 HECTD3Q5T447 861 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 TTC30AQ86WT1 665 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 EDEM2Q9BV94 578 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 KRT82Q9NSB4 513 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
PAF1-202ENST00000416728 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
PAF1-202ENST00000416728 RALGAPA1Q6GYQ0 2036 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ACTN4O43707 911 aaKnown RBP15.3■□□□□ 0.04
PAF1-202ENST00000416728 KLRC4O43908 158 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 AP1G2O75843 785 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 VNN1O95497 513 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 KLF8O95600 359 aaPredicted RBP15.3■□□□□ 0.04
PAF1-202ENST00000416728 TUBP50607 506 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 DNM1Q05193 864 aaKnown RBP15.3■□□□□ 0.04
PAF1-202ENST00000416728 KDSRQ06136 332 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 MESP2Q0VG99 397 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 HSF5Q4G112 596 aaPredicted RBP15.3■□□□□ 0.04
PAF1-202ENST00000416728 LY6G5CQ5SRR4 150 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 PAQR9Q6ZVX9 377 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ACOT1Q86TX2 421 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 C12orf40Q86WS4 652 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ALLCQ8N6M5 410 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 MDGA1Q8NFP4 955 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ELMO3Q96BJ8 720 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 OTUB2Q96DC9 234 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ZFRQ96KR1 1074 aaKnown RBP15.3■□□□□ 0.04
PAF1-202ENST00000416728 NACA2Q9H009 215 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 SDCBP2Q9H190 292 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 GMIPQ9P107 970 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 SH3BP1Q9Y3L3 701 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 GREB1Q4ZG55 1949 aa15.3■□□□□ 0.04
PAF1-202ENST00000416728 PTPRDP23468 1912 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 NR3C1P04150 777 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
PAF1-202ENST00000416728 TIE1P35590 1138 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 GRIA2P42262 883 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 DLG4P78352 724 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 GAD2Q05329 585 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 PKP1Q13835 747 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 ZACNQ401N2 412 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 SNX30Q5VWJ9 437 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 BTBD8Q5XKL5 378 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 TMEM92Q6UXU6 159 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 SFTPA1Q8IWL2 248 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 IL17RCQ8NAC3 791 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 TXNDC5Q8NBS9 432 aaKnown RBP15.29■□□□□ 0.04
PAF1-202ENST00000416728 TMEM174Q8WUU8 243 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 LSM14BQ9BX40 385 aaKnown RBP15.29■□□□□ 0.04
PAF1-202ENST00000416728 KCTD10Q9H3F6 313 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 CCSER2Q9H7U1 834 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 POLMQ9NP87 494 aaPredicted RBP15.29■□□□□ 0.04
PAF1-202ENST00000416728 COMMD8Q9NX08 183 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 IL37Q9NZH6 218 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
PAF1-202ENST00000416728 ACACBO00763 2458 aa15.29■□□□□ 0.04
PAF1-202ENST00000416728 FAM92AA1XBS5 289 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 SGK1O00141 431 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 PDXKO00764 312 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 CCDC130P13994 396 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 HNRNPLP14866 589 aaKnown RBP eCLIP15.28■□□□□ 0.04
PAF1-202ENST00000416728 TRIM21P19474 475 aaKnown RBP15.28■□□□□ 0.04
PAF1-202ENST00000416728 BCKDHBP21953 392 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 KIR2DL1P43626 348 aaPredicted RBP15.28■□□□□ 0.04
PAF1-202ENST00000416728 ORC1Q13415 861 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
PAF1-202ENST00000416728 CEP135Q66GS9 1140 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 CYP2U1Q7Z449 544 aa15.28■□□□□ 0.04
PAF1-202ENST00000416728 SLC2A14Q8TDB8 520 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms