RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 TRIP11Q15643 1979 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
UBA3-203ENST00000415609 ENDOD1O94919 500 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 DESP17661 470 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
UBA3-203ENST00000415609 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 SPATA21Q7Z572 469 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 SESTD1Q86VW0 696 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
UBA3-203ENST00000415609 SCN1AP35498 2009 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SMAPO00193 183 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 DPYSL4O14531 572 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBA3-203ENST00000415609 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 GPR32O75388 356 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SMIM10L2AP0DMW4 78 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SMIM10L2BP0DMW5 78 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 WDR4P57081 412 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SCUBE3Q8IX30 993 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 LRRC52Q8N7C0 313 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 PARK7Q99497 189 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 WDR83Q9BRX9 315 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 NXF3Q9H4D5 531 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 RABGEF1Q9UJ41 708 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 SMG5Q9UPR3 1016 aaKnown RBP12.9□□□□□ -0.34
UBA3-203ENST00000415609 NME7Q9Y5B8 376 aa12.9□□□□□ -0.34
UBA3-203ENST00000415609 A8MXQ7 604 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 E7ESA3 106 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 APOL1O14791 398 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 RECQL4O94761 1208 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 CYP2C9P11712 490 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 CA4P22748 312 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 FOXN2P32314 431 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SNX16P57768 344 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SPARCL1Q14515 664 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PDK2Q15119 407 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 FBF1Q8TES7 1133 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 LPIN3Q9BQK8 851 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SLC4A5Q9BY07 1137 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 ZMYND8Q9ULU4 1186 aaPredicted RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 CHMP2BQ9UQN3 213 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 HEY1Q9Y5J3 304 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 A0A1W2PPM1 405 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PAPSS1O43252 624 aaPredicted RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 HCRTO43612 131 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PIAS1O75925 651 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 DNAJC8O75937 253 aaPredicted RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 ASMTLO95671 621 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 GSTA1P08263 222 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 TAC1P20366 129 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 AKAP5P24588 427 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 ADORA2BP29275 332 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 RASA2Q15283 850 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 ZBTB6Q15916 424 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 FAM47EQ6ZV65 393 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 TMEM110Q86TL2 294 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SLC35F5Q8WV83 523 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 FAF2Q96CS3 445 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SNRNP25Q9BV90 132 aaKnown RBP12.89□□□□□ -0.35
UBA3-203ENST00000415609 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBA3-203ENST00000415609 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 SCN4AP35499 1836 aa12.89□□□□□ -0.35
UBA3-203ENST00000415609 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms