RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF263O14978 683 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ANP32DO95626 131 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ARP10275 920 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 PECAM1P16284 738 aaPredicted RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ITGB5P18084 799 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TFEBP19484 476 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ATP5DP30049 168 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 FKBP1BP68106 108 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MRPS9P82933 396 aaKnown RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 HTRA3P83110 453 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MYO1EQ12965 1108 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 USP4Q13107 963 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF267Q14586 743 aaPredicted RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 FAM209AQ5JX71 171 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 KLHDC7AQ5VTJ3 777 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CCDC80Q76M96 950 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 LSRQ86X29 649 aaPredicted RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ADAM32Q8TC27 787 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CHMP6Q96FZ7 201 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 WDR11Q9BZH6 1224 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 CYP39A1Q9NYL5 469 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 MAP10Q9P2G4 905 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 ZC3H7BQ9UGR2 993 aaKnown RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 GDAQ9Y2T3 454 aa9.83□□□□□ -0.84
SNHG3-201ENST00000413987 RBBP6Q7Z6E9 1792 aaKnown RBP9.83□□□□□ -0.84
SNHG3-201ENST00000413987 LCTP09848 1927 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 IGLV3-22A0A075B6J6 115 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 DDX39AO00148 427 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 MSH4O15457 936 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ASAP2O43150 1006 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CHMP2AO43633 222 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CLTBP09497 229 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CETPP11597 493 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 BPIP17213 487 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 DRD4P21917 467 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CXCR5P32302 372 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 LONP1P36776 959 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PSMC4P43686 418 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SULT1E1P49888 294 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CTAG1AP78358 180 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 MRPS25P82663 173 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PPARDQ03181 441 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SGCGQ13326 291 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 BLMHQ13867 455 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 BYSLQ13895 437 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF268Q14587 947 aaPredicted RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ACCSLQ4AC99 568 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ARL6IP4Q66PJ3 421 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 XKR5Q6UX68 686 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 NUDT18Q6ZVK8 323 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PLEKHM3Q6ZWE6 761 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SPATA2LQ8IUW3 424 aaPredicted RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CCDC65Q8IXS2 484 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ANKRD35Q8N283 1001 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 BTN2A2Q8WVV5 523 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 STAMBPL1Q96FJ0 436 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 EDEM3Q9BZQ6 932 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 GLT8D2Q9H1C3 349 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 BCAS3Q9H6U6 928 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SLC12A4Q9UP95 1085 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 H0YGN5 161 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 UBXN8O00124 270 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PALMO75781 387 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 HSD17B3P37058 310 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 USP11P51784 963 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PGM5Q15124 567 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SMAD1Q15797 465 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CNGA3Q16281 694 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 IFI16Q16666 785 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 KIAA0753Q2KHM9 967 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SPRED3Q2MJR0 410 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 DGKKQ5KSL6 1271 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ARHGEF16Q5VV41 709 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 IQSEC1Q6DN90 963 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CYP4F22Q6NT55 531 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 TTI2Q6NXR4 508 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 OLFML1Q6UWY5 402 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CSGALNACT2Q8N6G5 542 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SPERTQ8NA61 448 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ZSCAN18Q8TBC5 510 aaPredicted RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ETNPPLQ8TBG4 499 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ATP2A3Q93084 1043 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 THOC1Q96FV9 657 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF845Q96IR2 970 aaPredicted RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 CEP295NLQ96MC4 621 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 KRT12Q99456 494 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 MTRQ99707 1265 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 DDX23Q9BUQ8 820 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 GHITMQ9H3K2 345 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SLC39A2Q9NP94 309 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 PXMP2Q9NR77 195 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms