RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CHRDQ9H2X0 955 aa18.39■□□□□ 0.53
HSPG2-204ENST00000412328 EBF3Q9H4W6 596 aa18.39■□□□□ 0.53
HSPG2-204ENST00000412328 C8orf33Q9H7E9 229 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-204ENST00000412328 PRMT8Q9NR22 394 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-204ENST00000412328 GKN1Q9NS71 199 aa18.39■□□□□ 0.53
HSPG2-204ENST00000412328 OSER1Q9NX31 292 aa18.39■□□□□ 0.53
HSPG2-204ENST00000412328 PROB1E7EW31 1015 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 LEFTY2O00292 366 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 CYP26A1O43174 497 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 COCHO43405 550 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 TDGF1P13385 188 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 PDE6CP51160 858 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 RUNX3Q13761 415 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 CCINQ13939 588 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 ITPRIPL2Q3MIP1 535 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 NAIF1Q69YI7 327 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-204ENST00000412328 KIAA1958Q8N8K9 716 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 MLKLQ8NB16 471 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 CNOT6LQ96LI5 555 aaKnown RBP18.38■□□□□ 0.53
HSPG2-204ENST00000412328 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
HSPG2-204ENST00000412328 NELL2Q99435 816 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 ZSWIM1Q9BR11 485 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 DUSP16Q9BY84 665 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 CCSER2Q9H7U1 834 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 NMUR1Q9HB89 426 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 NDRG2Q9UN36 371 aaKnown RBP18.38■□□□□ 0.53
HSPG2-204ENST00000412328 CPQQ9Y646 472 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 WNT6Q9Y6F9 365 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
HSPG2-204ENST00000412328 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
HSPG2-204ENST00000412328 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-204ENST00000412328 KIF11P52732 1056 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 ZNF132P52740 706 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 LRMPQ12912 555 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 PDGFRLQ15198 375 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 RAB41Q5JT25 222 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 C1orf228Q6PIY5 440 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 BHLHA9Q7RTU4 235 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 C1orf210Q8IVY1 113 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 NELL1Q92832 810 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 KREMEN1Q96MU8 473 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 THG1LQ9NWX6 298 aaKnown RBP18.37■□□□□ 0.53
HSPG2-204ENST00000412328 SCML2Q9UQR0 700 aa18.37■□□□□ 0.53
HSPG2-204ENST00000412328 MRPS17Q9Y2R5 130 aaKnown RBP18.37■□□□□ 0.53
HSPG2-204ENST00000412328 O00370 1275 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 GREM1O60565 184 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 FRYLO94915 3013 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 GCNT1Q02742 428 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 MTAPQ13126 283 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 PKDCCQ504Y2 493 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 CCDC186Q7Z3E2 898 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 EZH1Q92800 747 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-204ENST00000412328 WBP2Q969T9 261 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 NT5C1BQ96P26 610 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 FBXO44Q9H4M3 255 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 CYLDQ9NQC7 956 aa18.36■□□□□ 0.53
HSPG2-204ENST00000412328 CHORDC1Q9UHD1 332 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-204ENST00000412328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.36■□□□□ 0.53
HSPG2-204ENST00000412328 OTOGLQ3ZCN5 2332 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 SPAG17Q6Q759 2223 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 PLXND1Q9Y4D7 1925 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 RNF225M0QZC1 329 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 TULP2O00295 520 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 CCDC192P0DO97 292 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 PON2Q15165 354 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 TMEM196Q5HYL7 178 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 MAMSTRQ6ZN01 415 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 Q6ZS52 159 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 SCD5Q86SK9 330 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 TFAP2BQ92481 460 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 ATOH1Q92858 354 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 HEXIM2Q96MH2 286 aaKnown RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 IER2Q9BTL4 223 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 INTS2Q9H0H0 1204 aaKnown RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 IRF2BPLQ9H1B7 796 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 LINC00597Q9H2U6 94 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 ECT2Q9H8V3 914 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 RBM12Q9NTZ6 932 aaKnown RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 DUS2Q9NX74 493 aaKnown RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 SMPD4Q9NXE4 827 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 TSPAN16Q9UKR8 245 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 CNTN6Q9UQ52 1028 aa18.35■□□□□ 0.53
HSPG2-204ENST00000412328 MYO18AQ92614 2054 aaKnown RBP18.35■□□□□ 0.53
HSPG2-204ENST00000412328 ZNF292O60281 2723 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 CYP17A1P05093 508 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 SP9P0CG40 484 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 CHRM1P11229 460 aaPredicted RBP18.34■□□□□ 0.53
HSPG2-204ENST00000412328 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
HSPG2-204ENST00000412328 GJA4P35212 333 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 GOLGA7BQ2TAP0 167 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 HECTD3Q5T447 861 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 PIGZQ86VD9 579 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 PPM1KQ8N3J5 372 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 ANKRD52Q8NB46 1076 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 EHBP1Q8NDI1 1231 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 ATP2A3Q93084 1043 aa18.34■□□□□ 0.53
HSPG2-204ENST00000412328 GBP4Q96PP9 640 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms