RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 CASD1Q96PB1 797 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 FAM193BQ96PV7 902 aaPredicted RBP18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 NEUROG2Q9H2A3 272 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 ELAC1Q9H777 363 aaKnown RBP18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 CYLDQ9NQC7 956 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 FAM153AQ9UHL3 310 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 ADAM21Q9UKJ8 722 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 LRFN2Q9ULH4 789 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 HPCAL4Q9UM19 191 aa18.41■□□□□ 0.54
LRPPRC-203ENST00000409946 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 SDC4P31431 198 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 SLC8A3P57103 927 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 DHX34Q14147 1143 aaKnown RBP18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 ACAP1Q15027 740 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.542e-9■■■□□ 19
LRPPRC-203ENST00000409946 LRRTM3Q86VH5 581 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 CCDC105Q8IYK2 499 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 FAM172AQ8WUF8 416 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 PKMYT1Q99640 499 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 ACBD6Q9BR61 282 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 LRRC19Q9H756 370 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 NRDE2Q9H7Z3 1164 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 KANSL3Q9P2N6 904 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 PCYOX1Q9UHG3 505 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 DSEQ9UL01 958 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 PCDHB8Q9UN66 801 aa18.4■□□□□ 0.54
LRPPRC-203ENST00000409946 CXCL10P02778 98 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 KRT7P08729 469 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 COL6A1P12109 1028 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 ECHS1P30084 290 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 CDKN2BP42772 138 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 FAM171BQ6P995 826 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 FBXO46Q6PJ61 603 aaPredicted RBP18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 APBB2Q92870 758 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 LRRC4Q9HBW1 653 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 GPATCH2LQ9NWQ4 482 aa18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 UTP11Q9Y3A2 253 aaKnown RBP18.39■□□□□ 0.54
LRPPRC-203ENST00000409946 MYO16Q9Y6X6 1858 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 FAM187AA6NFU0 413 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 OR4Q2P0C623 313 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 HSPA8P11142 646 aaKnown RBP18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 PCK1P35558 622 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 TKTL1P51854 596 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 EPHB4P54760 987 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 HLTFQ14527 1009 aaKnown RBP eCLIP18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 TFDP3Q5H9I0 405 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 MAIP1Q8WWC4 291 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 KCTD13Q8WZ19 329 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 HAUS1Q96CS2 278 aa18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 KIAA0100Q14667 2235 aaKnown RBP18.39■□□□□ 0.53
LRPPRC-203ENST00000409946 TMEM189-UBE2V1I3L0A0 370 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 TYMPP19971 482 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 BDNFP23560 247 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 KDELR1P24390 212 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 PBX3P40426 434 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 CETN2P41208 172 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 FNTAP49354 379 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 EMBQ6PCB8 327 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 HFE2Q6ZVN8 426 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 SIX6OS1Q8N1H7 587 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 CRIPAKQ8N1N5 446 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 DNAJC5GQ8N7S2 189 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 SPATA18Q8TC71 538 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 FAM149B1Q96BN6 582 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 SMARCD1Q96GM5 515 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 ULBP1Q9BZM6 244 aa18.38■□□□□ 0.53
LRPPRC-203ENST00000409946 HHLA1C9JL84 531 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 NRP1O14786 923 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 SCNN1AP37088 669 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 HDAC4P56524 1084 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 COPS2P61201 443 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 DYNLT1P63172 113 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 PITX1P78337 314 aaPredicted RBP18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 MRPS5P82675 430 aaKnown RBP18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 DUPD1Q68J44 220 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.37■□□□□ 0.532e-8■■■□□ 16.1
LRPPRC-203ENST00000409946 NPAS4Q8IUM7 802 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 DEFB106AQ8N104 65 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 THEM5Q8N1Q8 247 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 SEC14L1Q92503 715 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 ERP44Q9BS26 406 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 RAB17Q9H0T7 212 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 CALCOCO1Q9P1Z2 691 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 TBX21Q9UL17 535 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 SNX24Q9Y343 169 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 TBKBP1A7MCY6 615 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 TADA2AO75478 443 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 PAX3P23760 479 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 PTPN7P35236 360 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 SLC11A1P49279 550 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 MMRN1Q13201 1228 aa18.37■□□□□ 0.53
LRPPRC-203ENST00000409946 NNTQ13423 1086 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms