RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 BRWD1Q9NSI6 2320 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 E5RJQ4 531 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 FBXO21O94952 628 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 GZMAP12544 262 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 CDC25CP30307 473 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 NSFP46459 744 aaKnown RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PPP3CCP48454 512 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 TAF10Q12962 218 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 SMAD4Q13485 552 aaKnown RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 CLUL1Q15846 466 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 ASTE1Q2TB18 679 aaPredicted RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PRSS36Q5K4E3 855 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 CYP4A22Q5TCH4 519 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PM20D1Q6GTS8 502 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PHF13Q86YI8 300 aaPredicted RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PDZD8Q8NEN9 1154 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 CPA5Q8WXQ8 436 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 SUSD6Q92537 303 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 FBXO32Q969P5 355 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 PDLIM2Q96JY6 352 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 MIS12Q9H081 205 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 NHEJ1Q9H9Q4 299 aaPredicted RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 WDR6Q9NNW5 1121 aaKnown RBP17.49■□□□□ 0.39
SUMO1-208ENST00000409627 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
SUMO1-208ENST00000409627 CLUHO75153 1309 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 ZNF197O14709 1029 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 TADA3O75528 432 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 ZBED1O96006 694 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 F11P03951 625 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 ERBB2P04626 1255 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 MYL4P12829 197 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 LCP1P13796 627 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 MMP8P22894 467 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 GABRR2P28476 465 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 GABRB2P47870 512 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 NTHL1P78549 312 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 LEXMQ3ZCV2 418 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 GAREM2Q75VX8 874 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 TMEM150AQ86TG1 271 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 ERICH1Q86X53 443 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 IRGQQ8WZA9 623 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 DEF6Q9H4E7 631 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 TJP2Q9UDY2 1190 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 CDH22Q9UJ99 828 aa17.48■□□□□ 0.39
SUMO1-208ENST00000409627 USP15Q9Y4E8 981 aaPredicted RBP17.48■□□□□ 0.39
SUMO1-208ENST00000409627 A0A087X0T9 212 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 PIK3R2O00459 728 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 PAPSS1O43252 624 aaPredicted RBP17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SART1O43290 800 aaKnown RBP17.47■□□□□ 0.39
SUMO1-208ENST00000409627 MBTPS2O43462 519 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 ZDHHC11BP0C7U3 371 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 FAM228BP0C875 321 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 CCR2P41597 374 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 DAOAP59103 153 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 PTP4A2Q12974 167 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SLC18A3Q16572 532 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SLC5A9Q2M3M2 681 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SNX30Q5VWJ9 437 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 MON1BQ7L1V2 547 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 BHLHA9Q7RTU4 235 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 ZDHHC17Q8IUH5 632 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SHKBP1Q8TBC3 707 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 C18orf8Q96DM3 657 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 SYNCQ9H7C4 482 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 TAS2R14Q9NYV8 317 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 TRPM5Q9NZQ8 1165 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 GMIPQ9P107 970 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 NAGPAQ9UK23 515 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 NENFQ9UMX5 172 aa17.47■□□□□ 0.39
SUMO1-208ENST00000409627 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 A0A1W2PRU2 124 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 GRXCR2A6NFK2 248 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 AKR1B10O60218 316 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 RTN2O75298 545 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 MOSPD3O75425 235 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 CALB1P05937 261 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 FSHRP23945 695 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 PSEN1P49768 467 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 GSCP56915 257 aaPredicted RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 MRPS5P82675 430 aaKnown RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 CBX2Q14781 532 aaPredicted RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 PUS10Q3MIT2 529 aaKnown RBP17.46■□□□□ 0.39
SUMO1-208ENST00000409627 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 MON1AQ86VX9 555 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 TMEM139Q8IV31 216 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 SCUBE3Q8IX30 993 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 CCDC170Q8IYT3 715 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 ARHGAP18Q8N392 663 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 TCEAL4Q96EI5 215 aa17.46■□□□□ 0.39
SUMO1-208ENST00000409627 VCPIP1Q96JH7 1222 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms