RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 C8orf48Q96LL4 319 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 AFF4Q9UHB7 1163 aaKnown RBP17.69■□□□□ 0.42
SSB-202ENST00000409333 DENND4CQ5VZ89 1909 aa17.69■□□□□ 0.42
SSB-202ENST00000409333 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 ENC1O14682 589 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 TNFRSF10BO14763 440 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 SEC24AO95486 1093 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 SLC5A3P53794 718 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 RNASE9P60153 205 aaKnown RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 MRPS5P82675 430 aaKnown RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 CREMQ03060 361 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 UBE3AQ05086 875 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 CAMK1Q14012 370 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 TPGS2Q68CL5 300 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 SLFN11Q7Z7L1 901 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 SCAMP5Q8TAC9 235 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 MSRAQ9UJ68 235 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 TMEM59LQ9UK28 342 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 ANAPC1Q9H1A4 1944 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 USP17L7P0C7H9 530 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 ATF2P15336 505 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 ATF6P18850 670 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 DAOAP59103 153 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 SMC1AQ14683 1233 aaKnown RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 RAB30Q15771 203 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 DNTTIP2Q5QJE6 756 aaKnown RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 PPP2R2DQ66LE6 453 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 TRNP1Q6NT89 227 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 C11orf63Q6NUN7 778 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 SLC26A9Q7LBE3 791 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 CALR3Q96L12 384 aaKnown RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 CNGB3Q9NQW8 809 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 PACSIN2Q9UNF0 486 aaPredicted RBP17.68■□□□□ 0.42
SSB-202ENST00000409333 IRAK3Q9Y616 596 aa17.68■□□□□ 0.42
SSB-202ENST00000409333 C2orf71A6NGG8 1288 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 MYO1FO00160 1098 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 NCK2O43639 380 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 TUBB4AP04350 444 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 ATP1A1P05023 1023 aaKnown RBP17.67■□□□□ 0.42
SSB-202ENST00000409333 CASQ1P31415 396 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 IRS1P35568 1242 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 FLT3P36888 993 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 DAB2IPQ5VWQ8 1189 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 KLHL5Q96PQ7 755 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 CYP4F11Q9HBI6 524 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 ALG6Q9Y672 507 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 USP3Q9Y6I4 520 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
SSB-202ENST00000409333 H3BNC9 293 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 FSCN2O14926 492 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 FBXO21O94952 628 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 ZBED1O96006 694 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 SCNN1AP37088 669 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 USP46P62068 366 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 GPM6BQ13491 265 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 HFE2Q6ZVN8 426 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 BHLHA9Q7RTU4 235 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 NT5DC3Q86UY8 548 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 SYCE1Q8N0S2 351 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 MRPL43Q8N983 215 aaKnown RBP17.66■□□□□ 0.42
SSB-202ENST00000409333 NAPGQ99747 312 aaPredicted RBP17.66■□□□□ 0.42
SSB-202ENST00000409333 JRKLQ9Y4A0 524 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 C2CD4BA6NLJ0 364 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 YJEFN3A6XGL0 299 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 E7ENQ6 273 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 TGM5O43548 720 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 PROSCO94903 275 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 SPATA31D3P0C874 917 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 COMTP21964 271 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 EFHC1Q5JVL4 640 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 MEI1Q5TIA1 1274 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 SPATA31D4Q6ZUB0 917 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 PEX26Q7Z412 305 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 NUP93Q8N1F7 819 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 MICAL1Q8TDZ2 1067 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 FAM149B1Q96BN6 582 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 IP6K2Q9UHH9 426 aa17.66■□□□□ 0.42
SSB-202ENST00000409333 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 ADH1AP07327 375 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 GPD1P21695 349 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 TUFMP49411 452 aaKnown RBP17.65■□□□□ 0.42
SSB-202ENST00000409333 RPL10AP62906 217 aaKnown RBP17.65■□□□□ 0.42
SSB-202ENST00000409333 MTMR3Q13615 1198 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 PM20D1Q6GTS8 502 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 DENND5BQ6ZUT9 1274 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 GIPC2Q8TF65 315 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 RXFP2Q8WXD0 754 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 SPATA17Q96L03 361 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 TLR10Q9BXR5 811 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 NGRNQ9NPE2 291 aaKnown RBP17.65■□□□□ 0.42
SSB-202ENST00000409333 HSFX1Q9UBD0 423 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 YIPF1Q9Y548 306 aa17.65■□□□□ 0.42
SSB-202ENST00000409333 EPOPA6NHQ4 379 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms