RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 TSPAN18Q96SJ8 248 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 GPC6Q9Y625 555 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 YEATS2Q9ULM3 1422 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 OR14I1A6ND48 311 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 SMNDC1O75940 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
AFF3-202ENST00000409236 VAV1P15498 845 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 CCNCP24863 283 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ITGA9Q13797 1035 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 FUT11Q495W5 492 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 HPS1Q92902 700 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ISCUQ9H1K1 167 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 UBP1Q9NZI7 540 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 POLR1DQ9Y2S0 133 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 USP19O94966 1318 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 MAGEA4P43358 317 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 TWF1Q12792 350 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 C1orf189Q5VU69 101 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 CATSPER4Q7RTX7 472 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ZNF554Q86TJ5 538 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 CCNJLQ8IV13 435 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ANKRD7Q92527 254 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 PHTF1Q9UMS5 762 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 NR5A2O00482 541 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 POLR2EP19388 210 aaKnown RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 GCLMP48507 274 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 AP3S2P59780 193 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 KCTD1Q719H9 257 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ITIH6Q6UXX5 1313 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 RGS10O43665 173 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 TFE3P19532 575 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 MCCD1P59942 119 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 ARID3BQ8IVW6 561 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 UTYO14607 1347 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 LOC100506127A0A0U1RQW1 187 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 ROR2Q01974 943 aaKnown RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 SLC34A1Q06495 639 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
AFF3-202ENST00000409236 RAD54LQ92698 747 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
AFF3-202ENST00000409236 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 SEC24AO95486 1093 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 WEE2P0C1S8 567 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 HPCAL1P37235 193 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CBX5P45973 191 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 ZFP69Q49AA0 526 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 TTC23Q5W5X9 447 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 PALB2Q86YC2 1186 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 SLC13A5Q86YT5 568 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 CLVS1Q8IUQ0 354 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 ZCWPW1Q9H0M4 648 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 HAO1Q9UJM8 370 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 PADI4Q9UM07 663 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 NOS1APO75052 506 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 GLRA3O75311 464 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 TGM2P21980 687 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CCDC189A1A4V9 331 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 TPST1O60507 370 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 IFNAR1P17181 557 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 SP100P23497 879 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 SULT1E1P49888 294 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 BROXQ5VW32 411 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 SNIP1Q8TAD8 396 aaKnown RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 COPS7BQ9H9Q2 264 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 NFIAQ12857 509 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 SLC18A3Q16572 532 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 TWF2Q6IBS0 349 aaKnown RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 IRGCQ6NXR0 463 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 ASB14A6NK59 587 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 HOXB6P17509 224 aaKnown RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 PRELPP51888 382 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CHN2P52757 468 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 PROX1Q92786 737 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 GNG14A0A1W2PPG7 69 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 PEX3P56589 373 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
AFF3-202ENST00000409236 CDC16Q13042 620 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 LPIN1Q14693 890 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 C18orf8Q96DM3 657 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 WDR24Q96S15 920 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 STK33Q9BYT3 514 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 MIEF1Q9NQG6 463 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 FANCAO15360 1455 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 FGRP09769 529 aa14.28□□□□□ -0.12
AFF3-202ENST00000409236 ST8SIA6P61647 398 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms