RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SIGLEC16A6NMB1 481 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 PALMO75781 387 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 KLRC2P26717 231 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 SCNN1AP37088 669 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 GNG11P61952 73 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 MRPS5P82675 430 aaKnown RBP21.51■■□□□ 1.03
CHKB-201ENST00000406938 IFRD2Q12894 506 aaPredicted RBP21.51■■□□□ 1.03
CHKB-201ENST00000406938 TAF5Q15542 800 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 DCUN1D2Q6PH85 259 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 SLC26A9Q7LBE3 791 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 TRIM58Q8NG06 486 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 JOSD2Q8TAC2 188 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 FEZF2Q8TBJ5 459 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 NDRG1Q92597 394 aaKnown RBP21.51■■□□□ 1.03
CHKB-201ENST00000406938 SPATA17Q96L03 361 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 MAFFQ9ULX9 164 aa21.51■■□□□ 1.03
CHKB-201ENST00000406938 TMEM191CA6NGB0 347 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 PRRG1O14668 218 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 BUB1BO60566 1050 aaPredicted RBP21.5■■□□□ 1.03
CHKB-201ENST00000406938 GRAP2O75791 330 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 ZBED1O96006 694 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 USP17L7P0C7H9 530 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 ELF1P32519 619 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 RFC1P35251 1148 aaPredicted RBP21.5■■□□□ 1.03
CHKB-201ENST00000406938 DAOAP59103 153 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 PDE12Q6L8Q7 609 aaKnown RBP21.5■■□□□ 1.03
CHKB-201ENST00000406938 TCEAL8Q8IYN2 117 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 NUP93Q8N1F7 819 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 LRRC57Q8N9N7 239 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 CALR3Q96L12 384 aaKnown RBP21.5■■□□□ 1.03
CHKB-201ENST00000406938 GOLPH3Q9H4A6 298 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 USP3Q9Y6I4 520 aa21.5■■□□□ 1.03
CHKB-201ENST00000406938 SPATA31D3P0C874 917 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 RNASE9P60153 205 aaKnown RBP21.49■■□□□ 1.03
CHKB-201ENST00000406938 LILRA6Q6PI73 481 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 SPATA31D4Q6ZUB0 917 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 DENND5BQ6ZUT9 1274 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 SLC35F6Q8N357 371 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 EMC1Q8N766 993 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 KHSRPQ92945 711 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHKB-201ENST00000406938 WDR24Q96S15 920 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 TMEM59LQ9UK28 342 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 FBXW11Q9UKB1 542 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 INSL5Q9Y5Q6 135 aa21.49■■□□□ 1.03
CHKB-201ENST00000406938 CDH23Q9H251 3354 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 COL4A4P53420 1690 aaPredicted RBP21.48■■□□□ 1.03
CHKB-201ENST00000406938 SART1O43290 800 aaKnown RBP21.48■■□□□ 1.03
CHKB-201ENST00000406938 GLUD1P00367 558 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 CLCN4P51793 760 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 USP46P62068 366 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 ETF1P62495 437 aaKnown RBP21.48■■□□□ 1.03
CHKB-201ENST00000406938 EFHC1Q5JVL4 640 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 PM20D1Q6GTS8 502 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 C11orf63Q6NUN7 778 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 BHLHA9Q7RTU4 235 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 DAAM2Q86T65 1068 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 SCML4Q8N228 414 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 GIPC2Q8TF65 315 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 FAM149B1Q96BN6 582 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 LMAN2LQ9H0V9 348 aa21.48■■□□□ 1.03
CHKB-201ENST00000406938 YJEFN3A6XGL0 299 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 TMEM110-MUSTN1A8MSY1 372 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 E7ENQ6 273 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 MYO1FO00160 1098 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 FLT3P36888 993 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 OGDHQ02218 1023 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 ZNF252P-AS1Q0IIN9 211 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 MESDQ14696 234 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 TRNP1Q6NT89 227 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 CEP295NLQ96MC4 621 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 SLC38A8A6NNN8 435 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 HSF2BPO75031 334 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 ALDH1A3P47895 512 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 TWF1Q12792 350 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 MTMR3Q13615 1198 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 SYT10Q6XYQ8 523 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 HFE2Q6ZVN8 426 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 SLC7A14Q8TBB6 771 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 IRGQQ8WZA9 623 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 FBXO44Q9H4M3 255 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 ASNSD1Q9NWL6 643 aa21.47■■□□□ 1.03
CHKB-201ENST00000406938 PLXNA3P51805 1871 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 A0A1W2PPC1 479 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 C2CD4BA6NLJ0 364 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 FANCGO15287 622 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 RTN3O95197 1032 aaPredicted RBP21.46■■□□□ 1.03
CHKB-201ENST00000406938 FTCDO95954 541 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 TNNT1P13805 278 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 PTPROQ16827 1216 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 SYCE1Q8N0S2 351 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 KREMEN2Q8NCW0 462 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 FNIP1Q8TF40 1166 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 IL37Q9NZH6 218 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 IP6K2Q9UHH9 426 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 DNAI1Q9UI46 699 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 SCML2Q9UQR0 700 aa21.46■■□□□ 1.03
CHKB-201ENST00000406938 KIF2AO00139 706 aaPredicted RBP21.45■■□□□ 1.02
CHKB-201ENST00000406938 RFXAPO00287 272 aa21.45■■□□□ 1.02
CHKB-201ENST00000406938 CLASP2O75122 1294 aaKnown RBP21.45■■□□□ 1.02
CHKB-201ENST00000406938 DAB1O75553 588 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms