RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 GRID1Q9ULK0 1009 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PCDHB8Q9UN66 801 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 MAGED2Q9UNF1 606 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 EFR3BQ9Y2G0 817 aa4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 PRG3Q9Y2Y8 225 aaPredicted RBP4.93□□□□□ -1.62
PCDH11X-207ENST00000406881 STRCQ7RTU9 1775 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LRP5O75197 1615 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 A0A0G2JND7 137 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SDR42E2A6NKP2 422 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TCP11X1B4DZS4 312 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MYO1CO00159 1063 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ATP9BO43861 1147 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CAPN15O75808 1086 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MTA2O94776 668 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 APOA4P06727 396 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NFICP08651 508 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ETFBP38117 255 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SLC11A2P49281 568 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 HARS2P49590 506 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TKTL1P51854 596 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF143P52747 638 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CDH8P55286 799 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MAP3K10Q02779 954 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NOGQ13253 232 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ORC1Q13415 861 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DBN1Q16643 649 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MUM1Q2TAK8 710 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MDH1BQ5I0G3 518 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 OVOS1Q6IE37 1185 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DENND1BQ6P3S1 775 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CHSY1Q86X52 802 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 KIAA0319LQ8IZA0 1049 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 OR6P1Q8NGX9 317 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC39Q96DD0 335 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PGM2Q96G03 612 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF512Q96ME7 567 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TEPSINQ96N21 525 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 EFHD1Q9BUP0 239 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DMAP1Q9NPF5 467 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 OLA1Q9NTK5 396 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NDE1Q9NXR1 346 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TAS2R14Q9NYV8 317 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 GIT1Q9Y2X7 761 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PTCH2Q9Y6C5 1203 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD36CQ5JPF3 1778 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SRRM3A6NNA2 597 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ZBBXA8MT70 800 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 IGF2BP3O00425 579 aaKnown RBP eCLIP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SPAG7O75391 227 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LGR5O75473 907 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CSDE1O75534 798 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MMP3P08254 477 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 DARSP14868 501 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CYP2F1P24903 491 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MIPP30301 263 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NOS2P35228 1153 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ALDH1A3P47895 512 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ALDH7A1P49419 539 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 JAG1P78504 1218 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 PTP4A2Q12974 167 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC14Q15048 493 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TOP6BLQ8N6T0 577 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD52Q8NB46 1076 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SEMA4DQ92854 862 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 USP13Q92995 863 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 VAT1Q99536 393 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TMEM106CQ9BVX2 250 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC40Q9H9A6 602 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 HMX1Q9NP08 348 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ABI2Q9NYB9 513 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TRHDEQ9UKU6 1024 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ANGPTL2Q9UKU9 493 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CDH9Q9ULB4 789 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 USP20Q9Y2K6 914 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 FARP1Q9Y4F1 1045 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CCDC88AQ3V6T2 1871 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MARF1Q9Y4F3 1742 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 STRCP1A6NGW2 1772 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MYH2Q9UKX2 1941 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MAGEB16A2A368 324 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 OPHN1O60890 802 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NOL3O60936 208 aaKnown RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 SMIM24O75264 130 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MYCP01106 439 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ALDH2P05091 517 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 ARF4P18085 180 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 MMP8P22894 467 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 KDELR1P24390 212 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 AKAP5P24588 427 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CDK16Q00536 496 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 YWHAHQ04917 246 aaPredicted RBP4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 STX3Q13277 289 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 NAA25Q14CX7 972 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 AMHR2Q16671 573 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 CTXN3Q4LDR2 81 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 KCNT1Q5JUK3 1230 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 TRIM67Q6ZTA4 783 aa4.92□□□□□ -1.62
PCDH11X-207ENST00000406881 BBS12Q6ZW61 710 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms