RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 DUSP4Q13115 394 aa8.82□□□□□ -1
GPC3-203ENST00000406757 MTMR3Q13615 1198 aa8.82□□□□□ -1
GPC3-203ENST00000406757 DDR2Q16832 855 aa8.82□□□□□ -1
GPC3-203ENST00000406757 CLEC16AQ2KHT3 1053 aa8.82□□□□□ -1
GPC3-203ENST00000406757 RARS2Q5T160 578 aaKnown RBP8.82□□□□□ -1
GPC3-203ENST00000406757 LCLAT1Q6UWP7 414 aa8.82□□□□□ -1
GPC3-203ENST00000406757 FAM35AQ86V20 835 aa8.82□□□□□ -1
GPC3-203ENST00000406757 SPATA2LQ8IUW3 424 aaPredicted RBP8.82□□□□□ -1
GPC3-203ENST00000406757 SCN4BQ8IWT1 228 aa8.82□□□□□ -1
GPC3-203ENST00000406757 FEZF2Q8TBJ5 459 aa8.82□□□□□ -1
GPC3-203ENST00000406757 NDRG1Q92597 394 aaKnown RBP8.82□□□□□ -1
GPC3-203ENST00000406757 KLHL5Q96PQ7 755 aa8.82□□□□□ -1
GPC3-203ENST00000406757 HNRNPABQ99729 332 aaKnown RBP8.82□□□□□ -1
GPC3-203ENST00000406757 SMOQ99835 787 aa8.82□□□□□ -1
GPC3-203ENST00000406757 KRT82Q9NSB4 513 aa8.82□□□□□ -1
GPC3-203ENST00000406757 HESX1Q9UBX0 185 aa8.82□□□□□ -1
GPC3-203ENST00000406757 KIAA1257Q9ULG3 409 aa8.82□□□□□ -1
GPC3-203ENST00000406757 SORCS3Q9UPU3 1222 aa8.82□□□□□ -1
GPC3-203ENST00000406757 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
GPC3-203ENST00000406757 BACE2Q9Y5Z0 518 aa8.82□□□□□ -1
GPC3-203ENST00000406757 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
GPC3-203ENST00000406757 RCCD1A6NED2 376 aa8.81□□□□□ -1
GPC3-203ENST00000406757 GJB6O95452 261 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ABL1P00519 1130 aa8.81□□□□□ -1
GPC3-203ENST00000406757 FTLP02792 175 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 CYP1A1P04798 512 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 FAM200BP0CF97 657 aa8.81□□□□□ -1
GPC3-203ENST00000406757 UNGP13051 313 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 LCP1P13796 627 aa8.81□□□□□ -1
GPC3-203ENST00000406757 EPCAMP16422 314 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ABCB4P21439 1286 aa8.81□□□□□ -1
GPC3-203ENST00000406757 KLRC2P26717 231 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CYLC1P35663 651 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 GRIK1P39086 918 aa8.81□□□□□ -1
GPC3-203ENST00000406757 GPD2P43304 727 aa8.81□□□□□ -1
GPC3-203ENST00000406757 NOMO3P69849 1222 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ITIH3Q06033 890 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ADCY1Q08828 1119 aa8.81□□□□□ -1
GPC3-203ENST00000406757 IFRD2Q12894 506 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 GPR17Q13304 367 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CAMK2BQ13554 666 aa8.81□□□□□ -1
GPC3-203ENST00000406757 BMS1Q14692 1282 aaKnown RBP8.81□□□□□ -1
GPC3-203ENST00000406757 SLC18A3Q16572 532 aa8.81□□□□□ -1
GPC3-203ENST00000406757 MGAT5BQ3V5L5 792 aa8.81□□□□□ -1
GPC3-203ENST00000406757 PKDCCQ504Y2 493 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CYP4A22Q5TCH4 519 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ACAD10Q6JQN1 1059 aa8.81□□□□□ -1
GPC3-203ENST00000406757 PMF1Q6P1K2 205 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ALKBH5Q6P6C2 394 aaKnown RBP8.81□□□□□ -1
GPC3-203ENST00000406757 MMS22LQ6ZRQ5 1243 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CLEC20AQ6ZU45 233 aa8.81□□□□□ -1
GPC3-203ENST00000406757 GPRIN1Q7Z2K8 1008 aa8.81□□□□□ -1
GPC3-203ENST00000406757 VPS36Q86VN1 386 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ZNF677Q86XU0 584 aa8.81□□□□□ -1
GPC3-203ENST00000406757 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CCDC170Q8IYT3 715 aa8.81□□□□□ -1
GPC3-203ENST00000406757 TMEM105Q8N8V8 129 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ANKRD52Q8NB46 1076 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CCDC112Q8NEF3 446 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ZMIZ2Q8NF64 920 aa8.81□□□□□ -1
GPC3-203ENST00000406757 SPATA18Q8TC71 538 aa8.81□□□□□ -1
GPC3-203ENST00000406757 GIPC2Q8TF65 315 aa8.81□□□□□ -1
GPC3-203ENST00000406757 TRIM44Q96DX7 344 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 NECTIN4Q96NY8 510 aa8.81□□□□□ -1
GPC3-203ENST00000406757 SEPT5Q99719 369 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 C11orf70Q9BRQ4 267 aa8.81□□□□□ -1
GPC3-203ENST00000406757 DUSP16Q9BY84 665 aa8.81□□□□□ -1
GPC3-203ENST00000406757 DNAI2Q9GZS0 605 aa8.81□□□□□ -1
GPC3-203ENST00000406757 FAM124BQ9H5Z6 455 aaPredicted RBP8.81□□□□□ -1
GPC3-203ENST00000406757 RXFP1Q9HBX9 757 aa8.81□□□□□ -1
GPC3-203ENST00000406757 ST7Q9NRC1 585 aa8.81□□□□□ -1
GPC3-203ENST00000406757 TRMT1Q9NXH9 659 aaKnown RBP8.81□□□□□ -1
GPC3-203ENST00000406757 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
GPC3-203ENST00000406757 LIMD1Q9UGP4 676 aa8.81□□□□□ -1
GPC3-203ENST00000406757 NAGPAQ9UK23 515 aa8.81□□□□□ -1
GPC3-203ENST00000406757 NENFQ9UMX5 172 aa8.81□□□□□ -1
GPC3-203ENST00000406757 PCDHGC3Q9UN70 934 aa8.81□□□□□ -1
GPC3-203ENST00000406757 PCDHB5Q9Y5E4 795 aa8.81□□□□□ -1
GPC3-203ENST00000406757 PCDHA13Q9Y5I0 950 aa8.81□□□□□ -1
GPC3-203ENST00000406757 CARNS1A5YM72 827 aa8.8□□□□□ -1
GPC3-203ENST00000406757 USP27XA6NNY8 438 aa8.8□□□□□ -1
GPC3-203ENST00000406757 EIF3CLB5ME19 914 aaKnown RBP8.8□□□□□ -1
GPC3-203ENST00000406757 F8VP50 259 aa8.8□□□□□ -1
GPC3-203ENST00000406757 GOLGA8SH3BPF8 625 aa8.8□□□□□ -1
GPC3-203ENST00000406757 ARHGAP6O43182 974 aa8.8□□□□□ -1
GPC3-203ENST00000406757 TGM5O43548 720 aa8.8□□□□□ -1
GPC3-203ENST00000406757 RTN2O75298 545 aa8.8□□□□□ -1
GPC3-203ENST00000406757 ERBB2P04626 1255 aa8.8□□□□□ -1
GPC3-203ENST00000406757 MTHFRP42898 656 aa8.8□□□□□ -1
GPC3-203ENST00000406757 GALCP54803 685 aa8.8□□□□□ -1
GPC3-203ENST00000406757 SPA17Q15506 151 aa8.8□□□□□ -1
GPC3-203ENST00000406757 PTPN20Q4JDL3 420 aa8.8□□□□□ -1
GPC3-203ENST00000406757 SLC8B1Q6J4K2 584 aa8.8□□□□□ -1
GPC3-203ENST00000406757 TMC5Q6UXY8 1006 aa8.8□□□□□ -1
GPC3-203ENST00000406757 C4orf50Q6ZRC1 276 aa8.8□□□□□ -1
GPC3-203ENST00000406757 PIGZQ86VD9 579 aa8.8□□□□□ -1
GPC3-203ENST00000406757 ERICH1Q86X53 443 aa8.8□□□□□ -1
GPC3-203ENST00000406757 FMNL3Q8IVF7 1028 aa8.8□□□□□ -1
GPC3-203ENST00000406757 TDRD5Q8NAT2 981 aaKnown RBP8.8□□□□□ -1
GPC3-203ENST00000406757 TMEM35BQ8NCS4 154 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms