RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 CFAP97Q9P2B7 532 aa13.71□□□□□ -0.21
PRAME-206ENST00000406503 MBD1Q9UIS9 605 aaPredicted RBP13.71□□□□□ -0.21
PRAME-206ENST00000406503 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
PRAME-206ENST00000406503 UBE4BO95155 1302 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 COCHO43405 550 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 STX6O43752 255 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 PPP6R2O75170 966 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 KAT7O95251 611 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 KLF8O95600 359 aaPredicted RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 TNNI1P19237 187 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 EIF2DP41214 584 aaKnown RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 PPP3CCP48454 512 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 NOVA1P51513 510 aaKnown RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 CYP2J2P51589 502 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 CDH8P55286 799 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 ASIC1P78348 528 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 IRX4P78413 519 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 STK38Q15208 465 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 BMT2Q1RMZ1 405 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 STXBP4Q6ZWJ1 553 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 XXYLT1Q8NBI6 393 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 ZMIZ2Q8NF64 920 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 SCAMP5Q8TAC9 235 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 PNKPQ96T60 521 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
PRAME-206ENST00000406503 VRTNQ9H8Y1 702 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 IL37Q9NZH6 218 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 PLXNB3Q9ULL4 1909 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 TMEM131Q92545 1883 aa13.7□□□□□ -0.22
PRAME-206ENST00000406503 PTPRBP23467 1997 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 SMG1Q96Q15 3661 aaKnown RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 FAM92AA1XBS5 289 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 TRIM24O15164 1050 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 SPTLC2O15270 562 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 ABL1P00519 1130 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 ZDHHC11BP0C7U3 371 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 MBL2P11226 248 aaPredicted RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 ADH5P11766 374 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 TIE1P35590 1138 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 TNNC1P63316 161 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 KDSRQ06136 332 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 LY6G5CQ5SRR4 150 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 CYP2U1Q7Z449 544 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 C11orf74Q86VG3 221 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 C12orf56Q8IXR9 622 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 SLITRK1Q96PX8 696 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 SNX25Q9H3E2 840 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 CCSER2Q9H7U1 834 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 TFIP11Q9UBB9 837 aaKnown RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
PRAME-206ENST00000406503 ITPR1Q14643 2758 aa13.69□□□□□ -0.22
PRAME-206ENST00000406503 A8MXQ7 604 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 C1QTNF9BB2RNN3 333 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 GREM1O60565 184 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 BEST1O76090 585 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 VNN1O95497 513 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 C1QTNF9P0C862 333 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 SPINK2P20155 84 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 YWHAQP27348 245 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 PTGER3P43115 390 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 DHPSP49366 369 aaPredicted RBP13.68□□□□□ -0.22
PRAME-206ENST00000406503 SLC5A3P53794 718 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 ZNF252P-AS1Q0IIN9 211 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 CUL4BQ13620 913 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 SH3PXD2AQ5TCZ1 1133 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 TTC30AQ86WT1 665 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 BBS7Q8IWZ6 715 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 CCDC26Q8TAB7 109 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 OVCA2Q8WZ82 227 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 FBXO32Q969P5 355 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 CD248Q9HCU0 757 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 SLC39A2Q9NP94 309 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 TMEM9BQ9NQ34 198 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 EHD2Q9NZN4 543 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
PRAME-206ENST00000406503 HMGXB4Q9UGU5 601 aa13.68□□□□□ -0.22
PRAME-206ENST00000406503 CHORDC1Q9UHD1 332 aaPredicted RBP13.68□□□□□ -0.22
PRAME-206ENST00000406503 EVLQ9UI08 416 aaPredicted RBP13.68□□□□□ -0.22
PRAME-206ENST00000406503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
PRAME-206ENST00000406503 E2F8A0AVK6 867 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms