RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
TPM1-207ENST00000403994 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 IL37Q9NZH6 218 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 GMIPQ9P107 970 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 CFAP97Q9P2B7 532 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 GMEB2Q9UKD1 530 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 MYOFQ9NZM1 2061 aa16.29■□□□□ 0.2
TPM1-207ENST00000403994 FAM92AA1XBS5 289 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 COCHO43405 550 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 BEST1O76090 585 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 MBL2P11226 248 aaPredicted RBP16.28■□□□□ 0.2
TPM1-207ENST00000403994 TUBP50607 506 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 WDR5BQ86VZ2 330 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
TPM1-207ENST00000403994 ENGASEQ8NFI3 743 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 CSNK1G1Q9HCP0 422 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 RALGAPA1Q6GYQ0 2036 aa16.28■□□□□ 0.2
TPM1-207ENST00000403994 HRO43593 1189 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 ATG13O75143 517 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 ZDHHC11BP0C7U3 371 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 FAM200BP0CF97 657 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
TPM1-207ENST00000403994 CD58P19256 250 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 ADORA2BP29275 332 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 CNR2P34972 360 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 OPRD1P41143 372 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 MXI1P50539 228 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 MAP3K7CLP57077 242 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 MCCD1P59942 119 aaPredicted RBP16.27■□□□□ 0.2
TPM1-207ENST00000403994 NR1H3Q13133 447 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 SIM2Q14190 667 aaPredicted RBP16.27■□□□□ 0.2
TPM1-207ENST00000403994 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 GPRIN1Q7Z2K8 1008 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 RPLP0P6Q8NHW5 317 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 PARD6AQ9NPB6 346 aa16.27■□□□□ 0.2
TPM1-207ENST00000403994 POLR3BQ9NW08 1133 aaPredicted RBP16.27■□□□□ 0.2
TPM1-207ENST00000403994 SPTBN2O15020 2390 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 SLC9A3R1O14745 358 aaPredicted RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 CILPO75339 1184 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 TRIM21P19474 475 aaKnown RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 TGM1P22735 817 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 GTF2H1P32780 548 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 PRCPP42785 496 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 PXNP49023 591 aaPredicted RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 PGFP49763 221 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 NUCB2P80303 420 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 COBLL1Q53SF7 1204 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 HECTD3Q5T447 861 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 ZNF658Q5TYW1 1059 aaPredicted RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 KRT39Q6A163 491 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 CLEC20AQ6ZU45 233 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 ACDQ96AP0 544 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 HHIPQ96QV1 700 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 HNRNPABQ99729 332 aaKnown RBP16.26■□□□□ 0.19
TPM1-207ENST00000403994 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 COMMD8Q9NX08 183 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 SLC8A2Q9UPR5 921 aa16.26■□□□□ 0.19
TPM1-207ENST00000403994 HHLA1C9JL84 531 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 SLC16A3O15427 465 aaKnown RBP16.25■□□□□ 0.19
TPM1-207ENST00000403994 CYP26A1O43174 497 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 DHCR24Q15392 516 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 ERMP1Q7Z2K6 904 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 GPR161Q8N6U8 529 aaKnown RBP16.25■□□□□ 0.19
TPM1-207ENST00000403994 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 ARID3AQ99856 593 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 FBXO44Q9H4M3 255 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
TPM1-207ENST00000403994 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
TPM1-207ENST00000403994 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 E2F8A0AVK6 867 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 CETN3O15182 167 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 TLR5O60602 858 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 SMC2O95347 1197 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 ADH1CP00326 375 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 RETP07949 1114 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 PMS1P54277 932 aaKnown RBP16.24■□□□□ 0.19
TPM1-207ENST00000403994 LMNB2Q03252 620 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 MESP2Q0VG99 397 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
TPM1-207ENST00000403994 CEP68Q76N32 757 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 SYT13Q7L8C5 426 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 C12orf40Q86WS4 652 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms