RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CEP83Q9Y592 693 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 KANK1Q14678 1352 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 CAMSAP1Q5T5Y3 1602 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 MROH2AA6NES4 1674 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 CLCA1A8K7I4 914 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 NPIPB8E9PQR5 432 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 PRRG2O14669 202 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 AREL1O15033 823 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 CCP110O43303 1012 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 RHOP08100 348 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPIFP30405 207 aaKnown RBP5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 SATB1Q01826 763 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 EIF2B5Q13144 721 aaKnown RBP5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 E2F2Q14209 437 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 ICE2Q659A1 982 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 SLC15A3Q8IY34 581 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 FANCBQ8NB91 859 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 B3GALNT2Q8NCR0 500 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 TOR1AIP2Q8NFQ8 470 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 MYCBPAPQ8TBZ2 947 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 Q96MF0 132 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 GDF15Q99988 308 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 CASS4Q9NQ75 786 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 TRMT13Q9NUP7 481 aaKnown RBP5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 DKK4Q9UBT3 224 aa5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB3P19-201ENST00000403971 RPRD2Q5VT52 1461 aaKnown RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 ABCC3O15438 1527 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 EFCAB6Q5THR3 1501 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 SETD1BQ9UPS6 1966 aaKnown RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 PIPSLA2A3N6 862 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 FAM234BA2RU67 622 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 RGS10O43665 173 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 NARSO43776 548 aaKnown RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 PIAS2O75928 621 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 SRGNP10124 158 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZEB1P37275 1124 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 TRAPPC10P48553 1259 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZNF750Q32MQ0 723 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 LY6G5CQ5SRR4 150 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 FAM83BQ5T0W9 1011 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 DEPDC1Q5TB30 811 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 SFRP4Q6FHJ7 346 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 GGT6Q6P531 493 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 CRTC1Q6UUV9 634 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 SYTL1Q8IYJ3 562 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 LNX2Q8N448 690 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 ATG4AQ8WYN0 398 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 NELL2Q99435 816 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 PSMD1Q99460 953 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 DHX36Q9H2U1 1008 aaKnown RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 HEYLQ9NQ87 328 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 RGS17Q9UGC6 210 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 LRCH1Q9Y2L9 728 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 SNX14Q9Y5W7 946 aa5.9□□□□□ -1.46
HMGB3P19-201ENST00000403971 NCANO14594 1321 aa5.9□□□□□ -1.47
HMGB3P19-201ENST00000403971 ARID4BQ4LE39 1312 aaPredicted RBP5.9□□□□□ -1.47
HMGB3P19-201ENST00000403971 ARHGAP31Q2M1Z3 1444 aa5.9□□□□□ -1.47
HMGB3P19-201ENST00000403971 CLTCQ00610 1675 aaKnown RBP5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 A0A087WV62 115 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 VWC2LB2RUY7 222 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 MATN3O15232 486 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 PLA2G6O60733 806 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 HGFP14210 728 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 GABRB3P28472 473 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 TECP42680 631 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 TRIM14Q14142 442 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 LY6KQ17RY6 165 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 VWA1Q6PCB0 445 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 USP49Q70CQ1 688 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 VRK3Q8IV63 474 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 SPARTQ8N0X7 666 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 GLIS1Q8NBF1 620 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 AIFM2Q9BRQ8 373 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 TTLL2Q9BWV7 592 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 MAGEB5Q9BZ81 275 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 KCTD5Q9NXV2 234 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 SLC39A10Q9ULF5 831 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 CAPN11Q9UMQ6 739 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 KIF1BO60333 1816 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 ANKRD30BQ9BXX2 1392 aa5.89□□□□□ -1.47
HMGB3P19-201ENST00000403971 ADAMTS3O15072 1205 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 PPFIA4O75335 1185 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 INMTO95050 263 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZNF202O95125 648 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 VNN1O95497 513 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ATICP31939 592 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 PDE6CP51160 858 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 TNFAIP2Q03169 654 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 PUM1Q14671 1186 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 STARD3Q14849 445 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 PTPAQ15257 358 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 TUBB8Q3ZCM7 444 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ABHD17BQ5VST6 288 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 KRT28Q7Z3Y7 464 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 MAVSQ7Z434 540 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 SLC44A3Q8N4M1 653 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ENAHQ8N8S7 591 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 CCDC150Q8NCX0 1101 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms